[MITgcm-support] Fatal error in PMPI_Comm_rank: Invalid communicator, error stack
Srinivasu U
srinivasu.u at incois.gov.in
Thu Sep 6 06:20:55 EDT 2018
Dear MITgcm support,
I am trying to run a tutorial example of tutorial_barotropic_gyre
I built it as follows
cd verification/tutorial_barotropic_gyre/build
module unload netcdf/4.2.1
module load netcdf/3.6.3_new
module load openmpi/1.8.4
export NETCDF_ROOT=”/gpfs1/home/Libs/INTEL/NETCDF-3.6.3_new”
export MPI_INC_DIR="/gpfs1/home/Libs/INTEL/OPENMPI/openmpi-1.8.4/include”
../../../tools/genmake2 -enable=mnc -mods ../code -optfile ../../../tools/build_options/linux_amd64_ifort+impi -mpi
make depend
make
cd ../run
ln -s ../input/* .
cp ../build/mitgcmuv .
But while running the model as follows
mpirun -np 4 ./mitgcmuv
I get the following error
Fatal error in PMPI_Comm_rank: Invalid communicator, error stack:
PMPI_Comm_rank(121): MPI_Comm_rank(comm=0x0, rank=0xeea1a4) failed
PMPI_Comm_rank(73).: Invalid communicator
Thanks in Advance.
Srinivasu U
Scientist-C, CSG,
Indian National Center for Ocean Information Services(INCOIS),
Hyderabad-500090.
Telephone:04023886146
Mobile:9032325438.
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