[MITgcm-support] adding diagnostics into NetCDF files

[Jonny Williams]

Hi Martin

Thanks very much, that is extremely helpful and I now have this working :)
I see now what my problem was!

I hope you had a great weekend.

Thanks again and all the best

Jonny



On 15 September 2014 08:34, Martin Losch <Martin.Losch at awi.de> wrote:

> Hi Jonny,
>
> the easiest way to get customized output is the diagnostics package. The
> ptracers.*.nc file is something of the “old” output that you get, when you
> have dumpFreq set in data&PARM03.
>
> After a model run with debugLevel >= 1 you’ll get a file
> available_diagnostics.log where your DICPCO2 probably shows up, if you have
> dic turned on. Then you just put it into an “output stream” defined in
> data.diagnostics. The diagnostics package needs to be turned on
> (useDIagnostics = .True. in data.pkg). There are plenty of examples of
> diagnostics output streams in the verification directory. Also there is
> some description in the documentation: <
> http://mitgcm.org/public/r2_manual/latest/online_documents/node264.html>
>
> M.
>
> On Sep 12, 2014, at 5:20 PM, Jonny Williams <Jonny.Williams at bristol.ac.uk>
> wrote:
>
> > Hi there
> >
> > I am running a model at the moment with the MNC and DIC packages
> (amongst others) and wish to add the DICPCO2 diagnostic to my output.
> >
> > Even though I have been using the MITgcm for a year or so, I have never
> actually had to alter the default output options so I'm not really sure
> where to start on this. Currently, I am getting a ptracers.nc output file
> which contains dic, alk, dop, po4 and o2 and these variables are presumably
> defined in a list somewhere which I need to add DICPCO2 to?
> >
> > I have the diagnostics package tuned on but my data.diagnostics file
> does not contain any of the outputs I am actually getting.
> >
> > Does anyone know where I could look for guidance on this? I have looked
> through the manual and can't find anything definitive.
> >
> > Thank you very much
> >
> > Jonny
> >
> > --
> > Dr Jonny Williams
> > School of Geographical Sciences
> > University of Bristol
> > University Road
> > BS8 1SS
> >
> > +44 (0)117 3318352
> > jonny.williams at bristol.ac.uk
> > bit.ly/jonnywilliams
> > _______________________________________________
> > MITgcm-support mailing list
> > MITgcm-support at mitgcm.org
> > http://mitgcm.org/mailman/listinfo/mitgcm-support
>
>
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-- 
Dr Jonny Williams
School of Geographical Sciences
University of Bristol
University Road
BS8 1SS

+44 (0)117 3318352
jonny.williams at bristol.ac.uk
bit.ly/jonnywilliams
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