[MITgcm-support] building on yellowstone

[Samar Khatiwala]

Hi Neil,

You also need to load impi to have the MPI header files in your path with:  module load impi

Once you load it redo genmake, make depend, etc.

Samar

On Mar 19, 2014, at 7:03 PM, Neil Patel <nigellius at gmail.com> wrote:

> Thanks. I got two errors when I attempted to build mitgcm using the build options files linked. The first is this:
> 
> EESUPPORT.h:175: error: mpif.h: No such file or directory
> 
> Perhaps I don't have the mpi module loaded correctly? These are the modules I have loaded (default ones, I think).
> 
>  1) ncarenv/1.0    
>  2) ncarbinlibs/1.0
>  3) intel/12.1.5
>  4) ncarcompilers/1.0
>  5) netcdf/4.3.0
> 
> Afterwards, make crashes with this, possibly related to the first error.
> 
> Cannot disable Fortran error message 6404
> all_proc_die.f(961): error #6404: This name does not have a type, and must have an explicit type.   [MPI_SUCCESS]
>         IF ( mpiRC .NE. MPI_SUCCESS ) THEN
> -------------------------^
> mpif90 -W0 -WB -fPIC -convert big_endian -assume byterecl -align -march=corei7 -axAVX  -O2 -ip -fp-model precise -traceback -ftz -c bar2.f
> compilation aborted for all_proc_die.f (code 1)
> 
> Anyone have an idea what the cause might be?
> 
> Thanks,
> 
> Neil
> 
>> 
>> 
>> ------------------------------
>> 
>> Message: 2
>> Date: Tue, 18 Mar 2014 19:55:11 -0700 (PDT)
>> From: "nigellius at gmail.com" <nigellius at gmail.com>
>> To: <mitgcm-support at mitgcm.org>
>> Subject: [MITgcm-support] Yellowstone
>> Message-ID:
>> 	<1202780850.1780.1395197720375.JavaMail.seven at ap03.prod.7sys.net>
>> Content-Type: text/plain; charset=UTF-8
>> 
>> Has anyone set up the mitgcm on the yellowstone supercomputer? If so what build options file did you use?
>> 
>> any other things i should be aware of?
>> 
>> Sent with Verizon Mobile Email
>> 
>> ------------------------------
>> 
>> Message: 3
>> Date: Tue, 18 Mar 2014 23:02:33 -0700
>> From: Ruth Musgrave <rmusgrave at ucsd.edu>
>> To: mitgcm-support at mitgcm.org
>> Subject: Re: [MITgcm-support] Yellowstone
>> Message-ID: <0DDB46D3-B9D8-4B3C-B003-B38A621FC2FB at ucsd.edu>
>> Content-Type: text/plain; charset=us-ascii
>> 
>> Hi,
>> 
>> I am using the MITgcm on Yellowstone using the optfile from this link:
>> 
>> http://mitgcm.org/pipermail/mitgcm-support/2013-September/008497.html
>> 
>> It runs great!
>> 
>> Ruth
>> 
>> On Mar 18, 2014, at 7:55 PM, "nigellius at gmail.com" <nigellius at gmail.com> wrote:
>> 
>>> Has anyone set up the mitgcm on the yellowstone supercomputer? If so what build options file did you use?
>>> 
>>> any other things i should be aware of?
>>> 
>>> Sent with Verizon Mobile Email
>>> _______________________________________________
>>> MITgcm-support mailing list
>>> MITgcm-support at mitgcm.org
>>> http://mitgcm.org/mailman/listinfo/mitgcm-support
>> 
>> 
>> 
> 
> 
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