[MITgcm-support] Diagnostics have not been filled

Pascal Bourgault pascal.bourgault at gmail.com
Tue Jul 10 11:07:18 EDT 2018


Hi,

In my data.diagnostics, I ask the model to output the "momVort3" and the
"DFrI_TH" diagnostic, and many others. I am using mpi and the following
packages are compiled in my mitgcmuv : gfp, flt, mnc, mdsio. Also, momVort3
and DFrI_TH both appear in the available_diagnostics.log file.

However, the output values for those are all zeros in the final files. For
example, in my dynDiag*.nc files, where I save UVEL, VVEL, WVEL and
momVort3, the three velocities look good, but momVort3 is only zeros.

In the STDERR.* of the model I have this
"""
(PID.TID 0000.0001) - WARNING - from DIAGNOSTICS_OUT at iter=     17286
(PID.TID 0000.0001) - WARNING -   diag.#   117 : DFrI_TH  (#   7 ) in
outp.Stream: tempDiag
(PID.TID 0000.0001) - WARNING -   has not been filled (ndiag=  0 )
(PID.TID 0000.0001) WARNING DIAGNOSTICS_OUT  => write ZEROS instead
(PID.TID 0000.0001) - WARNING - from DIAGNOSTICS_OUT at iter=     17286
(PID.TID 0000.0001) - WARNING -   diag.#   174 : momVort3 (#   4 ) in
outp.Stream: dynDiag
(PID.TID 0000.0001) - WARNING -   has not been filled (ndiag=  0 )
 """
repeating numberous times.

Are there some options in some *_OPTIONS.h files I need to turn on to save
those fields? I don't really understand the error...

I can provide any other config info needed, I just don't know what is
useful in this case...

Thanks!

--
Pascal
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