[MITgcm-support] Problems

[meh tab]

Dear all,
Thank you very much for helping me. I used your suggestions and they were
quite helpful in 2D problems but they does not work for 3D cases.
Do you have any idea what's wrong?
Regards,
Mehrdad


On Mon, May 19, 2014 at 12:16 PM, Martin Losch <Martin.Losch at awi.de> wrote:

> Hi Mehrdad,
>
> Michael’s (very good) suggestions with the singleCPUio/globalFile flags
> unfortunately works only for mds output (the *.meta/data pairs), but for
> netcdf (i.e., mnc), the singleCPUio/globalFile flags have no effect (not
> implemented).
>
> The current workaround is to use post-processing tools. I find the python
> script utils/python/MITgcmutils/scripts/gluemncbig most useful (requrires a
> working python installation).
> Alternatively there is the script pair gluemnc xplodemnc in utils/scripts
> (require the nco operators: nco.sourceforge.net)
>
> M.
>
> On May 18, 2014, at 12:40 AM, Michael Schaferkotter <
> schaferk at bellsouth.net> wrote:
>
> > For density in output files
> >
> > 1) In ./code sub directory you might have to modify DIAGNOSTICS_SIZE.h,
> depending on size of domain and how much data you write out.
> >
> > 2) in ./run sub directory
> >
> > a) data.pkg
> >
> >  useDiagnostics=.TRUE.
> >
> >  b) data.diagnostics
> >
> >   &diagnostics_list
> >
> >
> >   frequency(k)=-3600.,                          (For hourly dump)
> >   timePhase(k)=0.,
> >   fields(1,k)='RHOAnoma',
> >    filename(k)='Rhoanoma',
> >
> > Where k is the kth variable in the list.
> >
> >
> >
> >  For combining data into single files,
> >
> > In ./run/data
> >
> > globalFiles=.FALSE.
> > useSingleCpuIO=.TRUE.
> >
> > Also you/ll need to properly configure the mnc package similarly to the
> diagnostics package and compile with compiler compatible netCDF libraries.
> >
> >
> > Sent from an iOS device.
> >
> >> On May 17, 2014, at 14:48, meh tab <meryzoon at gmail.com> wrote:
> >>
> >> Dear sir/Madam,
> >> I have started using MITgcm software, recently for modeling internal
> >> wave. I have faced some problems and I could not understand the user's
> >> manual guidelines related to these problems. My problems are:
> >> 1- How can we add density variable to nc output file?
> >> 2- When using multiple CPU cores, the results are broken into several
> >> different files. How can I gather the results into one unique file?
> >> Beforehand, I appreciate your kindness for kind attention to my email.
> >> Sincerely Yours,
> >> Mehrdad Tabatabaei
> >>
> >> _______________________________________________
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> >> http://mitgcm.org/mailman/listinfo/mitgcm-support
> >
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>
>
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