[MITgcm-support] cubeSphereExchange and MPI error?
Anthony J. Coletti
ajcolett at geo.umass.edu
Mon Jul 7 22:25:11 EDT 2014
Hi Jean-Michel,
Apologies for the vague explanations...
What I should have said was when I submit my batch script to the
computer, it runs for about 5-6 seconds and crashes and this is the
error I encountered while trying to run a 32x6x32x15 configuration.
Ironically, my packages.conf includes exch2 and I do believe it compiles
with exch2.
Here is my packages.conf file:
cal
gfd
gmredi
bulk_force
thsice
seaice
exf
exch2
diagnostics
mdsio
Recently, I have encountered another error that you may be able to shed
some light on (it is below):
(PID.TID 0000.0001) *** ERROR *** EESET_PARMS: Error reading parameter
file "eedata"
(PID.TID 0000.0001) *** ERROR *** EEDIE: earlier error in
multi-proc/thread setting
(PID.TID 0000.0001) *** ERROR *** PROGRAM MAIN: ends with fatal Error
I encounter this in the global_ocean.cs32x15 tutorial using the
SIZE.h_mpi that comes with the run (no changes made). I also encounter
the same error when trying to initiate my 32x6x32x15 model runs. I
haven't had this problem in the past and I am using the same set-up.
This is my eedata file regarding the error:
&EEPARMS
#useCubedSphereExchange=.TRUE.,
#usingMPI=.TRUE., (specified with ' -mpi' when compiling)
nTx=1,
nTy=1,
&
Thanks for your advice Jean-Michel. Much appreciated! If there is
anything else you need from me, please let me know.
Anthony
On 7/7/2014 9:59 PM, Jean-Michel Campin wrote:
> Hi Anthony,
>
> normally, this error occurs when you set, in eedata:
> useCubedSphereExchange=.TRUE.,
> and you did not compile pkg/exch2 (exch2 not listed in packages.conf,
> that you can check also from PACKAGES_CONFIG.h, if ALLOW_EXCH2
> is #undef).
>
> Might be able to be give more helpful advices if you were providing
> more details regarding what you tried (other than "when trying to run").
>
> Cheers,
> Jean-Michel
>
> On Mon, Jul 07, 2014 at 02:09:02PM -0400, Anthony Coletti wrote:
>> Hi all,
>>
>> So I am still trying to debug and get the GCM running on this new computer and I ran into yet again another error. I come to ask for your expertise…
>>
>> When trying to run, I get ***ERROR*** EXCH-1 useCubedSphereExchange unsafe with usingMPI=.TRUE.
>>
>> I have ran the model before with these same exact settings, so I am not sure what the difference now is. Any advice?
>>
>> Thanks
>>
>> Anthony
>>
>> Anthony J. Coletti
>> Climate System Research Center
>> Department of Geosciences
>> Morrill Building
>> 611 N. Pleasant Street
>> 233 Morrill Science Center
>> University of Massachusetts-Amherst
>> paleoclimate.org
>> Email: ajcolett at geo.umass.edu
>> http://blogs.umass.edu/ajcolett/
>> http://necsc.umass.edu/people/anthony-coletti
>>
>> “For me, I am driven by two main philosophies: know more today about the world than I knew yesterday and lessen the suffering of others. You'd be surprised how far that gets you.” ― Neil deGrasse Tyson
>>
>>
>>
>>
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--
Anthony J. Coletti
Climate System Research Center
Department of Geosciences
University of Massachusetts-Amherst
paleoclimate.org
ajcolett at geo.umass.edu
http://blogs.umass.edu/ajcolett/
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