[MITgcm-support] MITgcm 40km resolution Arctic simulation

Jonny Williams Jonny.Williams at bristol.ac.uk
Wed Oct 23 13:30:05 EDT 2013


Hi there

Just to say that I now have this configuration working. I will post a
detailed how-to tomorrow.

Many thanks

Jonny


On 21 October 2013 17:45, Menemenlis, Dimitris (3248) <
Dimitris.Menemenlis at jpl.nasa.gov> wrote:

> Hi Jonny, the *.bin files are available here:
> http://ecco2.jpl.nasa.gov/data1/arctic/run_template2/
> I thought that you had already downloaded them?
> As Patrick says, the CVS server only contains
> code files you need to compile and the input
> parameter files for running the code.  For the binary
> files that specify grid configuration, surface
> forcing, and boundary conditions, you can use the
> ones from http://ecco2.jpl.nasa.gov/data1/arctic/run_template2/
> and http://ecco2.jpl.nasa.gov/data2/data/atmos/
>
> I will try to check-in a readme file later today that makes this explicit.
>
> Cheers
>
> Dimitris Menemenlis
>
> On Oct 21, 2013, at 9:33 AM, Patrick Heimbach wrote:
>
> > Hi Jonny,
> >
> > the model is looking for input fields.
> > For "non-standard" experiments (i.e. that are not part of the
> verification suite) and which are large, those fields are not placed in the
> CVS repository (would be too large).
> >
> > We'll try to place the required input somewhere on the ECCO data server.
> Watch this space (I need to find a spare moment...)
> >
> > -Patrick
> >
> > On Oct 21, 2013, at 9:20 AM, Jonny Williams <
> Jonny.Williams at bristol.ac.uk> wrote:
> >
> >> and incidentally, I have done a "grep" on the whole cs_36km directory
> and there appears to be no mention of any file called "LONC.bin.data" so I
> am not sure why the code is looking for this?
> >>
> >> Thanks
> >>
> >> Jonny
> >>
> >>
> >> On 21 October 2013 11:25, Jonny Williams <Jonny.Williams at bristol.ac.uk>
> wrote:
> >> Thanks a lot for this
> >>
> >> I've downloaded and compiled the job successfully but at run time I get
> the following in the error file...
> >>
> >> Warning: ieee_inexact is signaling
> >> ABNORMAL END: S/R MDS_READ_FIELD
> >> [NID 02177] 2013-10-21 10:03:34 Apid 6025263: initiated application
> termination
> >>
> >> ... which I assumer is due to the following in the STDERR.0000 file...
> >>
> >> (PID.TID 0000.0001) ** Warning ** DIAGNOSTICS_READPARMS: ignores
> "data.diagnostics" file since
> >> (PID.TID 0000.0001) ** Warning ** DIAGNOSTICS_READPARMS:
> useDiagnostics= F (set from "data.pkg")
> >> (PID.TID 0000.0001) ** WARNING ** INI_MODEL_IO: use tiled-files to
> write sections (for OBCS)
> >> (PID.TID 0000.0001) *** ERROR ***  MDS_READ_FIELD: filename:
> LONC.bin.data
> >> (PID.TID 0000.0001) *** ERROR ***  MDS_READ_FIELD: File does not exist
> >>
> >> Indeed there is no LONC.bin.data file present in the input directory so
> I assume this is the problem?
> >>
> >> Thanks again
> >>
> >> Jonny
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >> On 18 October 2013 22:12, Menemenlis, Dimitris (3248) <
> Dimitris.Menemenlis at jpl.nasa.gov> wrote:
> >> Jonny, hi again.  I did not get around to testing but Patrick Heimbach
> kindly provided
> >> a 36-km configuration that ran successfully in February.  I checked it
> in under: http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/arctic/cs_36km/
> >>
> >> I will try to take a quick look at it this weekend - but if you give it
> a try first and it works,
> >> let me know - or if there is still an error message or something
> missing - reply to this
> >> message, including mitgcm-support and we will try to help you.
> >>
> >> Cheers
> >>
> >> Dimitris Menemenlis
> >>
> >>
> >>
> >>
> >> --
> >> Dr Jonny Williams
> >> School of Geographical Sciences
> >> University of Bristol
> >> University Road
> >> BS8 1SS
> >>
> >> +44 (0)117 3318352
> >> jonny.williams at bristol.ac.uk
> >> bit.ly/jonnywilliams
> >>
> >>
> >>
> >> --
> >> Dr Jonny Williams
> >> School of Geographical Sciences
> >> University of Bristol
> >> University Road
> >> BS8 1SS
> >>
> >> +44 (0)117 3318352
> >> jonny.williams at bristol.ac.uk
> >> bit.ly/jonnywilliams
> >> _______________________________________________
> >> MITgcm-support mailing list
> >> MITgcm-support at mitgcm.org
> >> http://mitgcm.org/mailman/listinfo/mitgcm-support
> >
> >
> > ---
> > Patrick Heimbach | heimbach at mit.edu | http://www.mit.edu/~heimbach
> > MIT | EAPS 54-1420 | 77 Massachusetts Ave | Cambridge MA 02139 USA
> > FON +1-617-253-5259 | FAX +1-617-253-4464 | SKYPE patrick.heimbach
> >
>
>


-- 
Dr Jonny Williams
School of Geographical Sciences
University of Bristol
University Road
BS8 1SS

+44 (0)117 3318352
jonny.williams at bristol.ac.uk
bit.ly/jonnywilliams
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