[MITgcm-support] gluemnc and nc file restart

xiao at cims.nyu.edu xiao at cims.nyu.edu
Tue Jul 19 16:35:47 EDT 2011


Hi Jean-Michel,

Thank you for your reply.

In addition, do you/anyone has any idea about why I got error message "no
Y-coordinate found" when I use gluemnc to merge grid*.nc files?
Or is there any other/better method to merge the .nc file?

Thank you,
Xiao Xiao

在 周二, 七月 19, 2011 2:55 pm, Jean-Michel Campin 写道:
> Hi Xiao,
>
> I would recommend not to use NetCDF pickup-files
> but instead plain binary pickup-file (faster IO, safer restart
> and with more options, e.g., restarting from global pickup file),
> and to to use MNC for other input/output file.
> This is how are set-up all the
> verification experiments that uses MNC, e.g., in:
> verification/tutorial_barotropic_gyre/input/data.mnc
>> pickup_write_mnc=.FALSE.,
>> pickup_read_mnc=.FALSE.,
>
> Cheers,
> Jean-Michel
>
> On Tue, Jul 19, 2011 at 12:44:40PM -0400, xiao at cims.nyu.edu wrote:
>> Hi,
>>
>> I am trying to restart my simulation from a pickup file. I have a couple
>> of questions regarding MNC output.
>>
>> 1. When I ask for netCDF output (I tried both
>> outputTypesInclusive=.TRUE.
>> and outputTypesInclusive=.FALSE.). And I restart my simulation from a
>> pickup file. No matter whether the pickup file is netCDF or .meta&.data
>> file, it gives me an error messages:
>>
>> (PID.TID 0001.0001) *** ERROR *** MNC ERROR: variable 'RC' is already
>> defined in file 'grid.t151.nc' but using a different grid shape
>>
>> 2. When I try to use gluemnc to do:
>>      gluemnc grid.*.nc
>>   it gives me:
>>      no Y-coordinate found
>>      cannot continue
>>
>> But for the first quesiton above, I found that if the directory ONLY
>> including the pickup*.nc file, it can do restart. I think the problems
>> come from the grid*.nc file but I do not know why and how to deal with
>> it.
>>
>> Could anyone give me any suggestions?
>>
>> Thank you,
>> Xiao Xiao
>>
>>
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