[MITgcm-support] Problem building adjoint

Santha Akella santha.akella at gmail.com
Mon Jan 25 21:31:29 EST 2010


Hello Patrick,
Thanks so much !

It worked!
Santha

On Mon, Jan 25, 2010 at 9:22 PM, Patrick Heimbach <heimbach at mit.edu> wrote:

>
> Hi Santha,
>
> this error message indicates that at link time the compiler "sees"
> that the executable it generates exceeds the available memory.
>
> This is consistent with the fact that Pleiades (unfortunately) only has
> 512MB per
> processor (I think) compared to, e.g. Columbia or the GFDL Altix (which
> both had ~2GB).
> So you'll need to lower your number for your inner-most checkpoint
> which you've currently set to
>      integer    nchklev_1
>      parameter( nchklev_1      =    16 )
>
> Please give that a try.
> -Patrick
>
>
>
>
> On Jan 25, 2010, at 9:15 PM, Santha Akella wrote:
>
>  Dear MITgcm Users,
>>
>> I am trying to build my adjoint model on NASA-Pleiades , everything seems
>> to go well, but in the end of building, I get the following error message.
>> Please Help! I am attaching my Makefile, SIZE.h and tamc.h files. Thank you,
>> Santha
>> -------r_stats.o  ad_taf_output.o -L/nasa/sgi/mpt/1.23try08/lib64 -lmpi
>> -L/nasa/netcdf/3.6.0/intel/lib -lnetcdf
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o): In
>> function `for_waitid':
>> for_aio.c:(.text+0x13a8): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o): In
>> function `for_asynchronous':
>> for_aio.c:(.text+0x2cd7): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o): In
>> function `for__aio_release_lun':
>> for_aio.c:(.text+0x3633): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> for_aio.c:(.text+0x36f7): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> for_aio.c:(.text+0x3712): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o): In
>> function `for__aio_acquire_lun':
>> for_aio.c:(.text+0x3c27): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> for_aio.c:(.text+0x3c8f): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> for_aio.c:(.text+0x3dd9): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> for_aio.c:(.text+0x40c0): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o): In
>> function `for__aio_acquire_lun_fname':
>> for_aio.c:(.text+0x4369): relocation truncated to fit: R_X86_64_32S
>> against symbol `for__aio_lub_table' defined in COMMON section in
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o)
>> /nasa/intel/Compiler/11.0/083/lib/intel64/libifcore.a(for_aio.o): In
>> function `for__aio_error_handling':
>> for_aio.c:(.text+0x4b4b): additional relocation overflows omitted from the
>> output
>> make: *** [mitgcmuv_ad] Error 1
>> -------------------------
>>
>
> ---
> Patrick Heimbach | heimbach at mit.edu | http://www.mit.edu/~heimbach<http://www.mit.edu/%7Eheimbach>
> MIT | EAPS 54-1518 | 77 Massachusetts Ave | Cambridge MA 02139 USA
> FON +1-617-253-5259 | FAX +1-617-253-4464 | SKYPE patrick.heimbach
>
>
>
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