[MITgcm-support] MITgcm_contrib
Elja Huibregtse
J.N.Huibregtse at student.TUDelft.NL
Mon Apr 21 11:41:38 EDT 2008
Hi Martin,
Thanks for your reply! Unfortunately, it still doesn't work.
1) Trying: cvs co Mitgcm, leads again to:
cvs checkout: existing repository /u/gcmpack/CVSROOT/Emptydir does not match /u/gcmpack/MITgcm
cvs checkout: ignoring module MITgcm
connect to address 128.31.2.31: Connection timed out
Trying krb4 rsh...
connect to address 128.31.2.31: Connection timed out
trying normal rsh (/usr/bin/rsh)
forge.csail.mit.edu: Connection timed out
cvs [checkout aborted]: end of file from server (consult above messages if any)
2) I did the make depend step and indeed a link to cal.h was created. However, I just found out that (at least in my version...) calendarDumps is not created in cal.h but in model/inc/PARAMS.h (PARM_L). Furthermore, it turns out that several variables are not declared (hdiag, enum_som_limiter). However, declaring them, leads to new errors.
I really don't understand what is going on, although I think I am using wrong code-files and that CVS doesn't work properly.
Do you have some new suggestions?
Thanks, I really appreciate your help!
Elja
-----Original Message-----
From: mitgcm-support-bounces at mitgcm.org on behalf of Martin Losch
Sent: Mon 4/21/2008 2:57 PM
To: mitgcm-support at mitgcm.org
Subject: Re: [MITgcm-support] MITgcm_contrib
Hi Elja,
the problem may not be connected at all.
The first one I can't quite figure out, but it probabbly goes away,
when you checkout "everything" (cvs co MITgcm), and then only keep
global_ocean.cs32x15 and tutorial_held_suarez_cs/input in MITgcm/
verification.
The second one seems to be a problem with finding files. Did you do
the "make depend" step? "calendardumps" is declared in pkg/cal/cal.h
and a link to this file (and many other *.F and *.h files) should
appear in your build directory after the "make depend" step.
Martin
On 21 Apr 2008, at 13:45, Elja Huibregtse wrote:
> Hi all,
>
> I am trying to set up the cube-sphere integration with sea-ice on
> the cs32.grid by applying the steps described in:
> http://mitgcm.org/cgi-bin/viewcvs.cgi/MITgcm_contrib/high_res_cube/
> README.cs32
>
> While applying "cvs co MITgcm_code", "cvs co MITgcm/verification/
> global_ocean.cs32x15" and "cvs co MITgcm/verification/
> tutorial_held_suarez_cs/input", I get the error message:
>
> -----------------
> cvs checkout: existing repository /u/gcmpack/CVSROOT/Emptydir does
> not match /u/gcmpack/MITgcm/utils
> cvs checkout: ignoring module MITgcm/utils
> connect to address 128.31.2.31: Connection timed out
> Trying krb4 rsh...
> connect to address 128.31.2.31: Connection timed out
> trying normal rsh (/usr/bin/rsh)
> forge.csail.mit.edu: Connection timed out
> cvs [checkout aborted]: end of file from server (consult above
> messages if any)
> ------------------
>
> Although it seems like something is really going wrong, I am able
> to continue to build up the 1-cpu cube sphere. Compiling the
> program ("make -j") fails, however:
>
> ------------------
> pgf90 -r8 -Mextend -O3 -LNO:fusion=2 -c cal_time2dump.f
> pgf90 -r8 -Mextend -O3 -LNO:fusion=2 -c diagnostics_addtolist.f
> pgf90 -r8 -Mextend -O3 -LNO:fusion=2 -c diagnostics_init_varia.f
> pgf90 -r8 -Mextend -O3 -LNO:fusion=2 -c diagnostics_interp_p2p.f
> PGF90-S-0038-Symbol, calendardumps, has not been explicitly
> declared (cal_time2dump.f)
> 0 inform, 0 warnings, 1 severes, 0 fatal for cal_time2dump
> make: *** [cal_time2dump.o] Error 2
> make: *** Waiting for unfinished jobs....
> PGF90-S-0072-Assignment operation illegal to external procedure
> hdiag (diagnostics_addtolist.f: 922)
> PGF90-S-0038-Symbol, hdiag, has not been explicitly declared
> (diagnostics_addtolist.f)
> 0 inform, 0 warnings, 2 severes, 0 fatal for
> diagnostics_addtolist
> make: *** [diagnostics_addtolist.o] Error 2
> ------------------
>
> Do I have to declare the symbols myself? Or do the versions of
> MITgcm (I am using checkpoint58) and the cube-sphere part not
> match? How can I fix it, any ideas?
>
> Thanks for your help!
>
> Elja
>
>
> _______________________________________________
> MITgcm-support mailing list
> MITgcm-support at mitgcm.org
> http://mitgcm.org/mailman/listinfo/mitgcm-support
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