[MITgcm-support] gcc error

[Amitabh Mitra]

 Dear Sir,

 I was trying to run the sea ice experiment s12t_16x32
 
 on SGI Origin.
 
 But there is some problem in creating the Makefile.

 As per previous instructions of Mr. Ed Hill I downloaded

 the genmake file posted by him on May 11 2006 and made

 appropriate changes in the optfile which is attached

 with this mail. But the server gets hanged when I run

 the command shown below. SGI_2100 28% is the system prompt.

 Also I am sending the genmake_warnings.



 SGI_2100 28% sh ../../../tools/new-genmake2 
		-of ../../../tools/build_options/prabhat1

 GENMAKE :

 A program for GENerating MAKEfiles for the MITgcm project.  For a
 quick list of options, use "genmake -h" or for more detail see:

  http://mitgcm.org/devel_HOWTO/

 ===  Processing options files and arguments  ===
  getting local config information:  none found
 Warning:  ROOTDIR was not specified but there appears to be a copy of MITgcm at
 "../../.." so we'll try it.
  getting OPTFILE information:
    using OPTFILE="../../../tools/build_options/prabhat1"
  getting AD_OPTFILE information:
    using AD_OPTFILE="../../../tools/adjoint_options/adjoint_default"

 ===  Checking system libraries  ===
  Do we have the system() command using f90...  yes
  Do we have the fdate() command using f90...  yes
  Do we have the etime() command using f90...  yes
  Can we call simple C routines (here, "cloc()") using f90...  no
  Can we unlimit the stack size using f90...  no
  Can we register a signal handler using f90...  no
  Can we use stat() through C calls...  no
  Can we create NetCDF-enabled binaries...


-------------------------------------------------------------------

 After this there is no response by the server.

 So what changes can be done in the optfile so as to run the  experiment.

 Thanking You,
 
 With regards,

 Amitabh Mitra
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cc    -c genmake_test.c -o genmake_test.o
cc    -c genmake_test.c -o genmake_test.o
cc    -c genmake_tc_1.c -o genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "cloc_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.
cc    -c genmake_tc_1.c -o genmake_tc_1.o

running: check_HAVE_SETRLSTK()
      program hello
      external setrlstk
      call setrlstk()
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "setrlstk_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.
cc    -c genmake_tc_1.c -o genmake_tc_1.o
cc-1515 cc: WARNING File = genmake_tc_1.c, Line = 22
  A value of type "void *" cannot be assigned to an entity of type
          "void (*)(int, siginfo_t *, void *)".

      s.sa_sigaction = (void *)killhandler;
                     ^


running: check_HAVE_SIGREG()
      program hello
      integer anint
      common /iv/ anint
      external sigreg
      call sigreg(anint)
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "sigreg_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.

running: check_HAVE_STAT()
      program hello
      integer nbyte
      call tfsize(nbyte)
      print *," HELLO WORLD", nbyte
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o

running: check_netcdf_libs()
cc    -c genmake_test.c -o genmake_test.o
cc    -c genmake_tc_1.c -o genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "cloc_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.
cc    -c genmake_tc_1.c -o genmake_tc_1.o

running: check_HAVE_SETRLSTK()
      program hello
      external setrlstk
      call setrlstk()
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "setrlstk_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.
cc    -c genmake_tc_1.c -o genmake_tc_1.o
cc-1515 cc: WARNING File = genmake_tc_1.c, Line = 22
  A value of type "void *" cannot be assigned to an entity of type
          "void (*)(int, siginfo_t *, void *)".

      s.sa_sigaction = (void *)killhandler;
                     ^


running: check_HAVE_SIGREG()
      program hello
      integer anint
      common /iv/ anint
      external sigreg
      call sigreg(anint)
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "sigreg_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.

running: check_HAVE_STAT()
      program hello
      integer nbyte
      call tfsize(nbyte)
      print *," HELLO WORLD", nbyte
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o

running: check_netcdf_libs()
cc    -c genmake_test.c -o genmake_test.o
cc    -c genmake_tc_1.c -o genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "cloc_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.
cc    -c genmake_tc_1.c -o genmake_tc_1.o

running: check_HAVE_SETRLSTK()
      program hello
      external setrlstk
      call setrlstk()
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "setrlstk_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.
cc    -c genmake_tc_1.c -o genmake_tc_1.o
cc-1515 cc: WARNING File = genmake_tc_1.c, Line = 22
  A value of type "void *" cannot be assigned to an entity of type
          "void (*)(int, siginfo_t *, void *)".

      s.sa_sigaction = (void *)killhandler;
                     ^


running: check_HAVE_SIGREG()
      program hello
      integer anint
      common /iv/ anint
      external sigreg
      call sigreg(anint)
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o
ld32: ERROR   33 : Unresolved text symbol "sigreg_" -- 1st referenced by genmake_tc_2.o.
	Use linker option -v to see when and which objects, archives and dsos are loaded.  
ld32: INFO    152: Output file removed because of error.

running: check_HAVE_STAT()
      program hello
      integer nbyte
      call tfsize(nbyte)
      print *," HELLO WORLD", nbyte
      end
f90 -n32 -extend_source -bytereclen -o genmake_tc genmake_tc_2.f genmake_tc_1.o

running: check_netcdf_libs()
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#!/bin/bash
#
#  $Header: /u/gcmpack/MITgcm/tools/build_options/irix64_ip27_f77+mpi,v 1.1 2004/02/21 14:41:09 dimitri Exp $
#

S64='$(TOOLSDIR)/set64bitConst.sh'
MAKEDEPEND=makedepend
CPP='/usr/freeware/bin/gcc -E -traditional -P -'

DEFINES='-DALLOW_USE_MPI -DALWAYS_USE_MPI -DTARGET_SGI -DWORDLENGTH=4'
FC='f90'
FFLAGS='-n32 -extend_source -bytereclen'
FOPTIM='-O3 -OPT:Olimit=0:roundoff=3:div_split=ON:alias=typed'
LIBS='-lmpi'
INCLUDEDIRS='/usr/include'