[MITgcm-support] problems running mnc_assembly

[Martin Losch]

Eli,

I could reproduce your problem: [mydims.names] is empty and obviously 
setdiff in Matlab6.5 cannot handle that. I don't know why both 6.1 and 
7 can and 6.5 fails, but here's the quick fix:
before the call to setdiff in question replace the line containing 
setdiff with
>     if isempty([mydims.names])
>       addl = mydim_names;
>     else
>       addl = setdiff(mydim_names,[mydims.names]);
>     end

Martin

On Feb 6, 2005, at 9:00 AM, Eli Galanti wrote:

> hi Ed,
>
> I'm trying to run your example of mnc_assembly (mnc_assem_test) with 
> matlab 6.5
> and get the following errors. Any ideas what could cause the problem?
>
> thanks, Eli.
>
>>> mnc_assem_test
>
> Starting test with "exch1" geometry:
>
>   Found 4 files matching the pattern:  
> "exp0_20041126_0001/state.0000.%06d.nc"
>   Looking for variable:   iter
> ??? Error using ==> cellstr
> Input must be a string.
>
> Error in ==> 
> /usr/local/lib64/matlab13_sp1/toolbox/matlab/ops/@cell/setdiff.m
> On line 52  ==>     b = cellstr(b);
>
> Error in ==> 
> /a/home/cc/space/galanti/development/edhill/mnc_assembly/mnc_assemb
> ly.m
> On line 239  ==>     addl = setdiff(mydim_names,[mydims.names]);
>
> Error in ==> 
> /a/home/cc/space/galanti/development/edhill/mnc_assembly/mnc_assem_
> test.m
> On line 24  ==> [nt,nf] = mnc_assembly(fpat,vars);
> -- 
> Dr. Eli Galanti
> Department of Geophysics and Planetary Sciences
> Tel-Aviv University, Ramat Aviv 69978, Israel.
> Tel:  972-3-6408274   Fax:  972-3-6409282
> E-mail: galanti at tau.ac.il
>
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