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<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US">Salut Pascal,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US">I am not sure about the
</span><span lang="EN-US" style="mso-fareast-language:EN-US">“momVort3” diagnostic: have you tried to compute this term yourself with UVEL and VVEL to see what solution you get? For the “DFrI_TH” diagnostic, maybe your vertical diffusivity is just constant
everywhere? <o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US">Cheers,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US">Bertrand<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span style="font-size:12.0pt;color:black">De : </span></b><span style="font-size:12.0pt;color:black">MITgcm-support <mitgcm-support-bounces@mitgcm.org> au nom de Pascal Bourgault <pascal.bourgault@gmail.com><br>
<b>Répondre à : </b>"mitgcm-support@mitgcm.org" <mitgcm-support@mitgcm.org><br>
<b>Date : </b>mardi 10 juillet 2018 à 8:07 AM<br>
<b>À : </b>"mitgcm-support@mitgcm.org" <mitgcm-support@mitgcm.org><br>
<b>Objet : </b>[MITgcm-support] Diagnostics have not been filled<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">Hi, <o:p></o:p></p>
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<p class="MsoNormal">In my data.diagnostics, I ask the model to output the "momVort3" and the "DFrI_TH" diagnostic, and many others. I am using mpi and the following packages are compiled in my mitgcmuv : gfp, flt, mnc, mdsio. Also, momVort3 and DFrI_TH both
appear in the available_diagnostics.log file.<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">However, the output values for those are all zeros in the final files. For example, in my dynDiag*.nc files, where I save UVEL, VVEL, WVEL and momVort3, the three velocities look good, but momVort3 is only zeros.<o:p></o:p></p>
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<p class="MsoNormal">In the STDERR.* of the model I have this<br>
"""<br>
(PID.TID 0000.0001) - WARNING - from DIAGNOSTICS_OUT at iter= 17286<br>
(PID.TID 0000.0001) - WARNING - diag.# 117 : DFrI_TH (# 7 ) in outp.Stream: tempDiag<br>
(PID.TID 0000.0001) - WARNING - has not been filled (ndiag= 0 )<br>
(PID.TID 0000.0001) WARNING DIAGNOSTICS_OUT => write ZEROS instead<br>
(PID.TID 0000.0001) - WARNING - from DIAGNOSTICS_OUT at iter= 17286<br>
(PID.TID 0000.0001) - WARNING - diag.# 174 : momVort3 (# 4 ) in outp.Stream: dynDiag<br>
(PID.TID 0000.0001) - WARNING - has not been filled (ndiag= 0 )<br>
"""<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">repeating numberous times.<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">Are there some options in some *_OPTIONS.h files I need to turn on to save those fields? I don't really understand the error...<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">I can provide any other config info needed, I just don't know what is useful in this case...<o:p></o:p></p>
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<p class="MsoNormal">Thanks!<br>
<br>
--<o:p></o:p></p>
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<p class="MsoNormal">Pascal<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><o:p> </o:p></p>
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