<div dir="ltr">thanks! i tried 1.6.7 and it worked...</div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Jun 21, 2018 at 10:27 PM, Edward W Doddridge <span dir="ltr"><<a href="mailto:ewd@mit.edu" target="_blank">ewd@mit.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="word-wrap:break-word;line-break:after-white-space">
Hi Dan,
<div><br>
</div>
<div>There is a bug in<a href="https://github.com/sphinx-doc/sphinx/issues/5048" target="_blank"> Sphinx 1.7.5</a> that is causing the docs builds to fail. You can see that this is also affecting the continuous integration tests on Travis - <a href="https://travis-ci.org/MITgcm/MITgcm/jobs/394922177" target="_blank">https://travis-ci.org/<wbr>MITgcm/MITgcm/jobs/394922177</a></div>
<div><br>
</div>
<div>Manually setting a different version of Sphinx should fix this problem.</div>
<div><br>
</div>
<div>Cheers,</div>
<div>Ed</div>
<div><br>
<div>
<div style="color:rgb(0,0,0);font-family:Palatino;font-size:16px;font-style:normal;font-variant-caps:normal;font-weight:normal;letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span class="m_-7198275051440404227Apple-style-span" style="font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal;border-collapse:separate;border-spacing:0px"><br class="m_-7198275051440404227Apple-interchange-newline">
<hr style="font-family:Tahoma;font-size:13px">
<span class="m_-7198275051440404227Apple-style-span" style="font-family:Tahoma;font-size:13px"><font face="Tahoma" size="2"><span dir="ltr" style="font-size:10pt"><font size="1"><span style="font-size:13px"><font size="2"><b>Edward
Doddridge</b><br>
<i>Postdoctoral researcher</i></font></span></font></span></font></span></span></div>
<div style="color:rgb(0,0,0);font-family:Palatino;font-size:16px;font-style:normal;font-variant-caps:normal;font-weight:normal;letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span class="m_-7198275051440404227Apple-style-span" style="font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal;border-collapse:separate;border-spacing:0px"><span class="m_-7198275051440404227Apple-style-span" style="font-family:Tahoma;font-size:13px"><font face="Tahoma" size="2"><span dir="ltr" style="font-size:10pt"><font size="1"><span style="font-size:13px"><font size="2"><i>Earth,
Atmospheric and Planetary Sciences</i></font></span></font></span></font></span></span></div>
<div style="color:rgb(0,0,0);font-family:Palatino;font-size:16px;font-style:normal;font-variant-caps:normal;font-weight:normal;letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span class="m_-7198275051440404227Apple-style-span" style="font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal;border-collapse:separate;border-spacing:0px"><span class="m_-7198275051440404227Apple-style-span" style="font-family:Tahoma;font-size:13px"><font face="Tahoma" size="2"><span dir="ltr" style="font-size:10pt"><font size="1"><span style="font-size:13px"><font size="2"><i>Massachusetts
Institute of Technology</i></font></span></font></span></font></span></span></div>
<div style="color:rgb(0,0,0);font-family:Palatino;font-size:16px;font-style:normal;font-variant-caps:normal;font-weight:normal;letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<div style="font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal">
<span class="m_-7198275051440404227Apple-style-span" style="border-collapse:separate;font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal;text-align:-webkit-auto;border-spacing:0px"><span class="m_-7198275051440404227Apple-style-span" style="font-family:Tahoma;font-size:13px"><font face="Tahoma" size="2"><span dir="ltr" style="font-size:10pt"><font size="1"><span style="font-size:13px"><font size="2"><i><br>
</i></font></span></font></span></font></span></span></div>
<div style="font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal">
<span class="m_-7198275051440404227Apple-style-span" style="border-collapse:separate;font-variant-ligatures:normal;font-variant-numeric:normal;font-variant-alternates:normal;font-variant-east-asian:normal;line-height:normal;text-align:-webkit-auto;border-spacing:0px"><span class="m_-7198275051440404227Apple-style-span" style="font-family:Tahoma;font-size:13px"><font face="Tahoma" size="2"><a href="http://www.doddridge.me" target="_blank">www.doddridge.me</a></font></span></span></div>
</div>
</div>
<div><br>
<blockquote type="cite"><div><div class="h5">
<div>On 21 Jun 2018, at 21:47, Daniel Goldberg <<a href="mailto:dan.goldberg@ed.ac.uk" target="_blank">dan.goldberg@ed.ac.uk</a>> wrote:</div>
<br class="m_-7198275051440404227Apple-interchange-newline">
</div></div><div><div><div class="h5">
<div dir="ltr">Hello All
<div><br>
</div>
<div>I am in the process of writing documentation for a physical package, and have installed the required libs following the instructions here:</div>
<div><br>
</div>
<div><a href="https://mitgcm.readthedocs.io/en/latest/contributing/contributing.html#building-the-manual" target="_blank">https://mitgcm.readthedocs.io/<wbr>en/latest/contributing/<wbr>contributing.html#building-<wbr>the-manual</a></div>
<div><br>
</div>
<div>however, on calling "make html" in the MITgcm/doc directory, i received the following errors (see attached log):</div>
<div><br>
</div>
<div>
<div style="font-size:small;background-color:rgb(255,255,255);text-decoration-style:initial;text-decoration-color:initial">
<div>Exception occurred:</div>
<div> File "/disk/scratch/local.2/fenics/<wbr>miniconda3/lib/python3.6/site-<wbr>packages/sphinx/environment/<wbr>collector s/toctree.py", line 172, in _walk_toc</div>
<div> subnode[0]['secnumber'] = list(number)</div>
<div>TypeError: 'NoneType' object is not iterable</div>
<div><br>
</div>
</div>
</div>
<div>There are continually python issues with my school's IT infrastructure but I thought that using miniconda would take care of this?</div>
<div><br>
</div>
<div>Is there another way of testing whether the libraries have installed correctly other than the test i have just done? (is the html generator run overnight?)</div>
<div><br>
</div>
<div>Thanks</div>
<div>Dan</div>
<div>
<div>
<div><br>
</div>
</div>
-- <br>
<div class="m_-7198275051440404227gmail_signature">
<div dir="ltr"><br style="font-size:12.8px">
<span style="font-size:12.8px">Daniel Goldberg, PhD</span><br style="font-size:12.8px">
<span style="font-size:12.8px">Lecturer in Glaciology</span>
<div style="font-size:12.8px">School of Geosciences, University of Edinburgh<br>
<span style="font-family:arial,helvetica,clean,sans-serif;line-height:15px">Geography Building, Drummond Street, Edinburgh EH8 9XP</span><br>
<br>
<br>
em: <a href="mailto:dgoldber@mit.edu" target="_blank">D</a><a href="mailto:an.Goldberg@ed.ac.uk" target="_blank">an.Goldberg@ed.ac.uk</a><br>
web: <a href="https://www.geos.ed.ac.uk/homes/dgoldber" target="_blank">https://www.geos.ed.ac.<wbr>uk/homes/dgoldber</a></div>
</div>
</div>
</div>
</div>
</div></div><span id="m_-7198275051440404227cid:714BEEB1-B5D2-46C8-B246-82D6B69BAEE8"><sphinx-err-8lq_htha.log></span>The University of Edinburgh is a charitable body, registered in<br>
Scotland, with registration number SC005336.<br>
______________________________<wbr>_________________<br>
MITgcm-support mailing list<br>
<a href="mailto:MITgcm-support@mitgcm.org" target="_blank">MITgcm-support@mitgcm.org</a><br>
<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target="_blank">http://mailman.mitgcm.org/<wbr>mailman/listinfo/mitgcm-<wbr>support</a><br>
</div>
</blockquote>
</div>
<br>
</div>
</div>
<br>______________________________<wbr>_________________<br>
MITgcm-support mailing list<br>
<a href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a><br>
<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" rel="noreferrer" target="_blank">http://mailman.mitgcm.org/<wbr>mailman/listinfo/mitgcm-<wbr>support</a><br>
<br></blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><br>Daniel Goldberg, PhD<br>Lecturer in Glaciology<div>School of Geosciences, University of Edinburgh<br><span style="color:rgb(0,0,0);font-family:arial,helvetica,clean,sans-serif;line-height:15px">Geography Building, Drummond Street, Edinburgh EH8 9XP</span><br><br><br>em: <a href="mailto:dan.goldberg@ed.ac.uk" target="_blank">dan.goldberg@ed.ac.uk</a><br>web: <a href="https://www.geos.ed.ac.uk/homes/dgoldber" target="_blank">https://www.geos.ed.ac.uk/homes/dgoldber</a></div></div></div></div></div></div></div></div></div>
</div>