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<p>Dear Rahele,</p>
<p>I think the problem in your data.ptracers is your use of the
ampersand (&). The ampersand is used in fortran namelists as
terminating character, i.e. your file is only read until the first
&, the rest is ignored. Replace the ampersand with a hash (#)
and put an ampersand behind PTRACERS_EvPrRn(3)= 0., then
everything should be o.k.</p>
<p>Cheers, Christoph<br>
</p>
<br>
<div class="moz-cite-prefix">Am 20.10.17 um 21:35 schrieb rahele
shafiee:<br>
</div>
<blockquote type="cite"
cite="mid:920657173.825477.1508528121058@mail.yahoo.com">
<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<div style="font-family:Helvetica Neue, Helvetica, Arial,
sans-serif;font-size:16px;">
<div>
<div>thanks for your response</div>
<div><br>
</div>
</div>
<div>My file is as follows:<br>
</div>
<div><br>
</div>
<div>
<div> PTRACERS_numInUse=3,</div>
<div> PTRACERS_names(1)='trac1',</div>
<div> PTRACERS_long_names(1)='tracer1',</div>
<div> PTRACERS_units(1)='psu',</div>
<div> PTRACERS_advScheme(1)=33,</div>
<div> PTRACERS_diffKh(1)=1.E3,</div>
<div> PTRACERS_diffKr(1)=3.E-5,</div>
<div> PTRACERS_ref(1:32,1) =32*37,</div>
<div> PTRACERS_initialFile(1)='Trac1_ini.bin',</div>
<div> PTRACERS_EvPrRn(1)= 0.,</div>
<div> &</div>
<div> PTRACERS_names(2)='trac2',</div>
<div> PTRACERS_long_names(2)='tracer2',</div>
<div> PTRACERS_units(2)='psu',</div>
<div> PTRACERS_advScheme(2)=33,</div>
<div> PTRACERS_diffKh(2)=1.E3,</div>
<div> PTRACERS_diffKr(2)=3.E-5,</div>
<div> PTRACERS_ref(1:32,2) =32*37,</div>
<div> PTRACERS_EvPrRn(2)= 0.,</div>
<div> &</div>
<div> PTRACERS_names(3)='trac3',</div>
<div> PTRACERS_long_names(3)='tracer3',</div>
<div> PTRACERS_units(3)='psu',</div>
<div> PTRACERS_advScheme(3)=33,</div>
<div> PTRACERS_diffKh(3)=1.E3,</div>
<div> PTRACERS_diffKr(3)=3.E-5,</div>
<div> PTRACERS_ref(1:32,3) =32*37,</div>
<div> PTRACERS_EvPrRn(3)= 0.,</div>
<br>
</div>
<div><br>
</div>
<div id="yahoo_quoted_9397192094" class="yahoo_quoted">
<div style="font-family:'Helvetica Neue', Helvetica, Arial,
sans-serif;font-size:13px;color:#26282a;">
<div> On Friday, October 20, 2017, 10:19:28 PM GMT+3:30,
<a class="moz-txt-link-abbreviated" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a>
<a class="moz-txt-link-rfc2396E" href="mailto:mitgcm-support-request@mitgcm.org"><mitgcm-support-request@mitgcm.org></a> wrote: </div>
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<div dir="ltr"> 1. Re: MITgcm-support Digest, Vol 172,
Issue 5 (Dustin Carroll)<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">----------------------------------------------------------------------<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">Message: 1<br>
</div>
<div dir="ltr">Date: Fri, 20 Oct 2017 11:49:00 -0700<br>
</div>
<div dir="ltr">From: Dustin Carroll <<a
ymailto="mailto:dcarroll@uoregon.edu"
href="mailto:dcarroll@uoregon.edu"
moz-do-not-send="true">dcarroll@uoregon.edu</a>><br>
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<div dir="ltr">To: <a
ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a><br>
</div>
<div dir="ltr">Subject: Re: [MITgcm-support]
MITgcm-support Digest, Vol 172, Issue 5<br>
</div>
<div dir="ltr">Message-ID: <<a
ymailto="mailto:1FD1B54E-1B4F-4172-B5B3-2FDFEDD36E05@uoregon.edu"
href="mailto:1FD1B54E-1B4F-4172-B5B3-2FDFEDD36E05@uoregon.edu"
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<div dir="ltr">Content-Type: text/plain; charset="utf-8"<br>
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<div dir="ltr"><br>
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<div dir="ltr">Hi Raheleh,<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">You can include multiple ptracers in your
simulation by explicitly specifying the tracer
names/initial files in your data.ptracers file,<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">e.g.,<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">PTRACERS_numInUse = 3,<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">PTRACERS_names(1) = ?tracer1',<br>
</div>
<div dir="ltr">PTRACERS_names(2) = ?tracer2',<br>
</div>
<div dir="ltr">PTRACERS_names(3) = ?tracer3?,<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">PTRACERS_initialFile(1)='tracer1.bin',<br>
</div>
<div dir="ltr">PTRACERS_initialFile(2)='tracer2.bin',<br>
</div>
<div dir="ltr">PTRACERS_initialFile(3)='tracer3.bin',<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">Post your data.ptracers file if you are
still having trouble after trying this,<br>
</div>
<div dir="ltr">Dustin<br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">> On Oct 20, 2017, at 11:38 AM, rahele
shafiee <<a ymailto="mailto:rahele_shafiee@yahoo.com"
href="mailto:rahele_shafiee@yahoo.com"
moz-do-not-send="true">rahele_shafiee@yahoo.com</a>>
wrote:<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Hi everyone<br>
</div>
<div dir="ltr">> I noticed that when the package (MNC)
is active in the model, I can not introduce more than
one tracer to my model and the error is as follows:<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> PTRACERS_MNC_INIT ERROR:
PTRACERS_names( 2) is blank--please name it in
'data.ptracers'<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> How can I have more tracers with this
package?<br>
</div>
<div dir="ltr">> Thanks if you guide me<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Raheleh<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> On Wednesday, October 18, 2017,
4:47:25 PM GMT+3:30, <a
ymailto="mailto:mitgcm-support-request@mitgcm.org"
href="mailto:mitgcm-support-request@mitgcm.org"
moz-do-not-send="true">mitgcm-support-request@mitgcm.org</a>
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href="mailto:mitgcm-support-request@mitgcm.org"
moz-do-not-send="true">mitgcm-support-request@mitgcm.org</a>>
wrote:<br>
</div>
<div dir="ltr">> <br>
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digest..."<br>
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</div>
<div dir="ltr">> Today's Topics:<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> 1. KPP parameters not read? (Donald
Slater)<br>
</div>
<div dir="ltr">> 2. Re: KPP parameters not read?
(Dimitris Menemenlis)<br>
</div>
<div dir="ltr">> 3. Re: KPP parameters not read?
(Donald Slater)<br>
</div>
<div dir="ltr">> 4. Re: KPP parameters not read?
(Donald Slater)<br>
</div>
<div dir="ltr">> 5. Number of tracers (rahele shafiee)<br>
</div>
<div dir="ltr">> 6. Input of warm water in depth
(Hadar Berman)<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">>
----------------------------------------------------------------------<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Message: 1<br>
</div>
<div dir="ltr">> Date: Tue, 17 Oct 2017 16:06:38 -0700<br>
</div>
<div dir="ltr">> From: Donald Slater <<a
ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>
<mailto:<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>>><br>
</div>
<div dir="ltr">> To: <a
ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> Subject: [MITgcm-support] KPP
parameters not read?<br>
</div>
<div dir="ltr">> Message-ID: <<a
ymailto="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu"
href="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu"
moz-do-not-send="true">30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu</a>
<mailto:<a
ymailto="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu"
href="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu"
moz-do-not-send="true">30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu</a>>><br>
</div>
<div dir="ltr">> Content-Type: text/plain;
charset=utf-8<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Hi,<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> I am running some simulations with the
KPP package enabled, but I think I have a strange
problem reading parameters from data.kpp. I noticed this
because I changed some parameters (difm0, difs0 and
dift0) without having any effect on my simulation.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> The output stream from my simulation
suggests that data.kpp is being read (i.e. I get the
lines "KPP_INIT: opening data.kpp ? OPEN_COPY_DATA_FILE:
opening file data.kpp ... KPP_INIT: finished reading
data.kpp?).<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> However if I try to trip the
simulation up by inserting things which don?t make sense
into data.kpp, for example setting "difm0 = Donald?, the
simulation carries on as usual with the default value
for difm0 and no error messages. In contrast, if I
insert something silly into data.icefront (e.g.
icefrontthetasurface = Donald), the simulation
immediately stops. This suggests to me that somehow
difm0 (and perhaps the other parameters in data.kpp) are
not actually being read.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> This reminds me a little of another
message on the support list (<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html
</a><<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>).
I?ve looked at kpp_readparms and compared it to similar
files for other packages but can?t see anything amiss.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Has anyone experienced this or can
offer any pointers as to what might be going on?<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Many thanks,<br>
</div>
<div dir="ltr">> Donald<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> ------------------------------<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Message: 2<br>
</div>
<div dir="ltr">> Date: Tue, 17 Oct 2017 16:13:42 -0700<br>
</div>
<div dir="ltr">> From: Dimitris Menemenlis <<a
ymailto="mailto:dmenemenlis@gmail.com"
href="mailto:dmenemenlis@gmail.com"
moz-do-not-send="true">dmenemenlis@gmail.com</a>
<mailto:<a ymailto="mailto:dmenemenlis@gmail.com"
href="mailto:dmenemenlis@gmail.com"
moz-do-not-send="true">dmenemenlis@gmail.com</a>>><br>
</div>
<div dir="ltr">> To: MITgcm Support <<a
ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>>><br>
</div>
<div dir="ltr">> Subject: Re: [MITgcm-support] KPP
parameters not read?<br>
</div>
<div dir="ltr">> Message-ID: <<a
ymailto="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com"
href="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com"
moz-do-not-send="true">A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com</a>
<mailto:<a
ymailto="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com"
href="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com"
moz-do-not-send="true">A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com</a>>><br>
</div>
<div dir="ltr">> Content-Type: text/plain;
charset=utf-8<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Did you specify "useKPP=.TRUE." in
data.pkg?<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> > On Oct 17, 2017, at 4:06 PM,
Donald Slater <<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>
<mailto:<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>>>
wrote:<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > Hi,<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > I am running some simulations
with the KPP package enabled, but I think I have a
strange problem reading parameters from data.kpp. I
noticed this because I changed some parameters (difm0,
difs0 and dift0) without having any effect on my
simulation.<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > The output stream from my
simulation suggests that data.kpp is being read (i.e. I
get the lines "KPP_INIT: opening data.kpp ?
OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT:
finished reading data.kpp?).<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > However if I try to trip the
simulation up by inserting things which don?t make sense
into data.kpp, for example setting "difm0 = Donald?, the
simulation carries on as usual with the default value
for difm0 and no error messages. In contrast, if I
insert something silly into data.icefront (e.g.
icefrontthetasurface = Donald), the simulation
immediately stops. This suggests to me that somehow
difm0 (and perhaps the other parameters in data.kpp) are
not actually being read.<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > This reminds me a little of
another message on the support list (<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html
</a><<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>).
I?ve looked at kpp_readparms and compared it to similar
files for other packages but can?t see anything amiss.<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > Has anyone experienced this or
can offer any pointers as to what might be going on?<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > Many thanks,<br>
</div>
<div dir="ltr">> > Donald<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> >
_______________________________________________<br>
</div>
<div dir="ltr">> > MITgcm-support mailing list<br>
</div>
<div dir="ltr">> > <a
ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> > <a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
</a><<a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> ------------------------------<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Message: 3<br>
</div>
<div dir="ltr">> Date: Tue, 17 Oct 2017 16:16:30 -0700<br>
</div>
<div dir="ltr">> From: Donald Slater <<a
ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>
<mailto:<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>>><br>
</div>
<div dir="ltr">> To: <a
ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> Subject: Re: [MITgcm-support] KPP
parameters not read?<br>
</div>
<div dir="ltr">> Message-ID: <<a
ymailto="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu"
href="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu"
moz-do-not-send="true">BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu</a>
<mailto:<a
ymailto="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu"
href="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu"
moz-do-not-send="true">BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu</a>>><br>
</div>
<div dir="ltr">> Content-Type: text/plain;
charset=utf-8<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Hi,<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Yes I did. Sorry I should have
specified that. I also know that KPP is running because
I?ve got the diagnostic KPPviscA printing out and it
gives me variable vertical viscosity as expected for KPP
under the default parameters.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Donald<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> > On Oct 17, 2017, at 4:13 PM,
Dimitris Menemenlis <<a
ymailto="mailto:dmenemenlis@gmail.com"
href="mailto:dmenemenlis@gmail.com"
moz-do-not-send="true">dmenemenlis@gmail.com</a>
<mailto:<a ymailto="mailto:dmenemenlis@gmail.com"
href="mailto:dmenemenlis@gmail.com"
moz-do-not-send="true">dmenemenlis@gmail.com</a>>>
wrote:<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > Did you specify "useKPP=.TRUE."
in data.pkg?<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> >> On Oct 17, 2017, at 4:06 PM,
Donald Slater <<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>
<mailto:<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>>>
wrote:<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> Hi,<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> I am running some simulations
with the KPP package enabled, but I think I have a
strange problem reading parameters from data.kpp. I
noticed this because I changed some parameters (difm0,
difs0 and dift0) without having any effect on my
simulation.<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> The output stream from my
simulation suggests that data.kpp is being read (i.e. I
get the lines "KPP_INIT: opening data.kpp ?
OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT:
finished reading data.kpp?).<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> However if I try to trip the
simulation up by inserting things which don?t make sense
into data.kpp, for example setting "difm0 = Donald?, the
simulation carries on as usual with the default value
for difm0 and no error messages. In contrast, if I
insert something silly into data.icefront (e.g.
icefrontthetasurface = Donald), the simulation
immediately stops. This suggests to me that somehow
difm0 (and perhaps the other parameters in data.kpp) are
not actually being read.<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> This reminds me a little of
another message on the support list (<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html
</a><<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>).
I?ve looked at kpp_readparms and compared it to similar
files for other packages but can?t see anything amiss.<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> Has anyone experienced this
or can offer any pointers as to what might be going on?<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> Many thanks,<br>
</div>
<div dir="ltr">> >> Donald<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >>
_______________________________________________<br>
</div>
<div dir="ltr">> >> MITgcm-support mailing list<br>
</div>
<div dir="ltr">> >> <a
ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> >> <a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
</a><<a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> >
_______________________________________________<br>
</div>
<div dir="ltr">> > MITgcm-support mailing list<br>
</div>
<div dir="ltr">> > <a
ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> > <a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
</a><<a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> ------------------------------<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Message: 4<br>
</div>
<div dir="ltr">> Date: Tue, 17 Oct 2017 16:45:11 -0700<br>
</div>
<div dir="ltr">> From: Donald Slater <<a
ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>
<mailto:<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>>><br>
</div>
<div dir="ltr">> To: <a
ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> Subject: Re: [MITgcm-support] KPP
parameters not read?<br>
</div>
<div dir="ltr">> Message-ID: <<a
ymailto="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu"
href="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu"
moz-do-not-send="true">C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu</a>
<mailto:<a
ymailto="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu"
href="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu"
moz-do-not-send="true">C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu</a>>><br>
</div>
<div dir="ltr">> Content-Type: text/plain;
charset=utf-8<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Just to clarify, as in retrospect my
previous email was a little confusing.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> I do have "useKPP=.TRUE." in data.pkg.
And I know KPP is running because I get the expected
variable vertical viscosity when I print out the
relevant diagnostic.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> But I still have the issue with the
simulation appearing to ignore the parameters in
data.kpp<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Thanks,<br>
</div>
<div dir="ltr">> Donald<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> > On Oct 17, 2017, at 4:13 PM,
Dimitris Menemenlis <<a
ymailto="mailto:dmenemenlis@gmail.com"
href="mailto:dmenemenlis@gmail.com"
moz-do-not-send="true">dmenemenlis@gmail.com</a>
<mailto:<a ymailto="mailto:dmenemenlis@gmail.com"
href="mailto:dmenemenlis@gmail.com"
moz-do-not-send="true">dmenemenlis@gmail.com</a>>>
wrote:<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> > Did you specify "useKPP=.TRUE."
in data.pkg?<br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> >> On Oct 17, 2017, at 4:06 PM,
Donald Slater <<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>
<mailto:<a ymailto="mailto:daslater@ucsd.edu"
href="mailto:daslater@ucsd.edu" moz-do-not-send="true">daslater@ucsd.edu</a>>>
wrote:<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> Hi,<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> I am running some simulations
with the KPP package enabled, but I think I have a
strange problem reading parameters from data.kpp. I
noticed this because I changed some parameters (difm0,
difs0 and dift0) without having any effect on my
simulation.<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> The output stream from my
simulation suggests that data.kpp is being read (i.e. I
get the lines "KPP_INIT: opening data.kpp ?
OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT:
finished reading data.kpp?).<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> However if I try to trip the
simulation up by inserting things which don?t make sense
into data.kpp, for example setting "difm0 = Donald?, the
simulation carries on as usual with the default value
for difm0 and no error messages. In contrast, if I
insert something silly into data.icefront (e.g.
icefrontthetasurface = Donald), the simulation
immediately stops. This suggests to me that somehow
difm0 (and perhaps the other parameters in data.kpp) are
not actually being read.<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> This reminds me a little of
another message on the support list (<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html
</a><<a
href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>).
I?ve looked at kpp_readparms and compared it to similar
files for other packages but can?t see anything amiss.<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> Has anyone experienced this
or can offer any pointers as to what might be going on?<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >> Many thanks,<br>
</div>
<div dir="ltr">> >> Donald<br>
</div>
<div dir="ltr">> >> <br>
</div>
<div dir="ltr">> >>
_______________________________________________<br>
</div>
<div dir="ltr">> >> MITgcm-support mailing list<br>
</div>
<div dir="ltr">> >> <a
ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> >> <a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
</a><<a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br>
</div>
<div dir="ltr">> > <br>
</div>
<div dir="ltr">> >
_______________________________________________<br>
</div>
<div dir="ltr">> > MITgcm-support mailing list<br>
</div>
<div dir="ltr">> > <a
ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org"
href="mailto:MITgcm-support@mitgcm.org"
moz-do-not-send="true">MITgcm-support@mitgcm.org</a>><br>
</div>
<div dir="ltr">> > <a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support%20"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
</a><<a
href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support"
target="_blank" moz-do-not-send="true">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> ------------------------------<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Message: 5<br>
</div>
<div dir="ltr">> Date: Wed, 18 Oct 2017 08:16:17 +0000
(UTC)<br>
</div>
<div dir="ltr">> From: rahele shafiee <<a
ymailto="mailto:rahele_shafiee@yahoo.com"
href="mailto:rahele_shafiee@yahoo.com"
moz-do-not-send="true">rahele_shafiee@yahoo.com</a>
<mailto:<a ymailto="mailto:rahele_shafiee@yahoo.com"
href="mailto:rahele_shafiee@yahoo.com"
moz-do-not-send="true">rahele_shafiee@yahoo.com</a>>><br>
</div>
<div dir="ltr">> To: MITgcm Support <<a
ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>
<mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org"
href="mailto:mitgcm-support@mitgcm.org"
moz-do-not-send="true">mitgcm-support@mitgcm.org</a>>>,<br>
</div>
<div dir="ltr">> "<a
ymailto="mailto:mitgcm-support-request@mitgcm.org"
href="mailto:mitgcm-support-request@mitgcm.org"
moz-do-not-send="true">mitgcm-support-request@mitgcm.org</a>
<mailto:<a
ymailto="mailto:mitgcm-support-request@mitgcm.org"
href="mailto:mitgcm-support-request@mitgcm.org"
moz-do-not-send="true">mitgcm-support-request@mitgcm.org</a>>"<br>
</div>
<div dir="ltr">> <<a
ymailto="mailto:mitgcm-support-request@mitgcm.org"
href="mailto:mitgcm-support-request@mitgcm.org"
moz-do-not-send="true">mitgcm-support-request@mitgcm.org</a>
<mailto:<a
ymailto="mailto:mitgcm-support-request@mitgcm.org"
href="mailto:mitgcm-support-request@mitgcm.org"
moz-do-not-send="true">mitgcm-support-request@mitgcm.org</a>>><br>
</div>
<div dir="ltr">> Subject: [MITgcm-support] Number of
tracers<br>
</div>
<div dir="ltr">> Message-ID: <<a
ymailto="mailto:967454873.90466.1508314577675@mail.yahoo.com"
href="mailto:967454873.90466.1508314577675@mail.yahoo.com"
moz-do-not-send="true">967454873.90466.1508314577675@mail.yahoo.com</a>
<mailto:<a
ymailto="mailto:967454873.90466.1508314577675@mail.yahoo.com"
href="mailto:967454873.90466.1508314577675@mail.yahoo.com"
moz-do-not-send="true">967454873.90466.1508314577675@mail.yahoo.com</a>>><br>
</div>
<div dir="ltr">> Content-Type: text/plain;
charset="utf-8"<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Hi every oneI want to add two tracers
to my model. I set in the PTRACERS_SIZE.hthe number of
tracers and set the data.ptracers file for tracers. When
thenumber of my tracers is 1, I have no problem in
running the model, but with theaddition of the number of
tracers, the model gives an error: (PTRACERS_MNC_INIT
ERROR: PTRACERS_names(? 2) is blank--please name it in
'data.ptracers')? While tracer name 2 is not blank. Do I
need othersettings?Best ragard?Raheleh<br>
</div>
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</div>
<div dir="ltr">> ------------------------------<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Message: 6<br>
</div>
<div dir="ltr">> Date: Wed, 18 Oct 2017 16:16:56 +0300<br>
</div>
<div dir="ltr">> From: Hadar Berman <<a
ymailto="mailto:hadarberman@gmail.com"
href="mailto:hadarberman@gmail.com"
moz-do-not-send="true">hadarberman@gmail.com</a>
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moz-do-not-send="true">hadarberman@gmail.com</a>>><br>
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<div dir="ltr">> To: <a
ymailto="mailto:mitgcm-support@mitgcm.org"
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moz-do-not-send="true">mitgcm-support@mitgcm.org</a>
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<div dir="ltr">> Subject: [MITgcm-support] Input of
warm water in depth<br>
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<div dir="ltr">> Message-ID: <<a
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<div dir="ltr">> Dear all,<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> I am using the MITgcm with specified
heat and water fluxes and relaxation for the region of
the Gulf of Elat. <br>
</div>
<div dir="ltr">> I would like to check how an input of
warmer water entering in different depths from the
boundary can effect the surrounding water. <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> I have tried using the obcs pkg, but
specifying the temperature in the boundary seems to have
a higher effect then should be, and it is not correlated
with the discharge (or velocities) entering though the
boundary (even when specifying velocities of zero, I
still see a great effect due to the temperature of the
boundary). <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> As far as I can tell, since I need to
check the effect of the water entering in differing
depths (and not only on the surface), I can not use the
surface forcing via evaporation minus precipitation
(EmPmRFile) or the external forcing package
(runoffFile). <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> Any ideas?<br>
</div>
<div dir="ltr">> Thanks,<br>
</div>
<div dir="ltr">> Hadar Berman.<br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
</div>
<div dir="ltr">> <br>
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<div dir="ltr">> <br>
</div>
<div dir="ltr">> ------------------------------<br>
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<div dir="ltr">> <br>
</div>
<div dir="ltr">> Subject: Digest Footer<br>
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<div dir="ltr">> <br>
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_______________________________________________<br>
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<div dir="ltr">> ------------------------------<br>
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<div dir="ltr">> End of MITgcm-support Digest, Vol 172,
Issue 5<br>
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<div dir="ltr">>
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<div dir="ltr">Subject: Digest Footer<br>
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<div dir="ltr">End of MITgcm-support Digest, Vol 172,
Issue 9<br>
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<pre wrap="">_______________________________________________
MITgcm-support mailing list
<a class="moz-txt-link-abbreviated" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>
<a class="moz-txt-link-freetext" href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support">http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>
</pre>
</blockquote>
<br>
<pre class="moz-signature" cols="72">--
Christoph Voelker
Alfred Wegener Institute for Polar and Marine Research
Am Handelshafen 12
27570 Bremerhaven, Germany
e: <a class="moz-txt-link-abbreviated" href="mailto:Christoph.Voelker@awi.de">Christoph.Voelker@awi.de</a>
t: +49 471 4831 1848</pre>
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