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<div><div>thanks for your response</div><div><br></div></div><div>My file is as follows:<br></div><div><br></div><div><div> PTRACERS_numInUse=3,</div><div> PTRACERS_names(1)='trac1',</div><div> PTRACERS_long_names(1)='tracer1',</div><div> PTRACERS_units(1)='psu',</div><div> PTRACERS_advScheme(1)=33,</div><div> PTRACERS_diffKh(1)=1.E3,</div><div> PTRACERS_diffKr(1)=3.E-5,</div><div> PTRACERS_ref(1:32,1) =32*37,</div><div> PTRACERS_initialFile(1)='Trac1_ini.bin',</div><div> PTRACERS_EvPrRn(1)= 0.,</div><div> &</div><div> PTRACERS_names(2)='trac2',</div><div> PTRACERS_long_names(2)='tracer2',</div><div> PTRACERS_units(2)='psu',</div><div> PTRACERS_advScheme(2)=33,</div><div> PTRACERS_diffKh(2)=1.E3,</div><div> PTRACERS_diffKr(2)=3.E-5,</div><div> PTRACERS_ref(1:32,2) =32*37,</div><div> PTRACERS_EvPrRn(2)= 0.,</div><div> &</div><div> PTRACERS_names(3)='trac3',</div><div> PTRACERS_long_names(3)='tracer3',</div><div> PTRACERS_units(3)='psu',</div><div> PTRACERS_advScheme(3)=33,</div><div> PTRACERS_diffKh(3)=1.E3,</div><div> PTRACERS_diffKr(3)=3.E-5,</div><div> PTRACERS_ref(1:32,3) =32*37,</div><div> PTRACERS_EvPrRn(3)= 0.,</div><br></div><div><br></div>
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On Friday, October 20, 2017, 10:19:28 PM GMT+3:30, mitgcm-support-request@mitgcm.org <mitgcm-support-request@mitgcm.org> wrote:
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<div><div dir='ltr'>Send MITgcm-support mailing list submissions to<br></div><div dir='ltr'> <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a><br></div><div dir='ltr'><br></div><div dir='ltr'>To subscribe or unsubscribe via the World Wide Web, visit<br></div><div dir='ltr'> <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a><br></div><div dir='ltr'>or, via email, send a message with subject or body 'help' to<br></div><div dir='ltr'> <a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a><br></div><div dir='ltr'><br></div><div dir='ltr'>You can reach the person managing the list at<br></div><div dir='ltr'> <a ymailto="mailto:mitgcm-support-owner@mitgcm.org" href="mailto:mitgcm-support-owner@mitgcm.org">mitgcm-support-owner@mitgcm.org</a><br></div><div dir='ltr'><br></div><div dir='ltr'>When replying, please edit your Subject line so it is more specific<br></div><div dir='ltr'>than "Re: Contents of MITgcm-support digest..."<br></div><div dir='ltr'><br></div><div dir='ltr'><br></div><div dir='ltr'>Today's Topics:<br></div><div dir='ltr'><br></div><div dir='ltr'> 1. Re: MITgcm-support Digest, Vol 172, Issue 5 (Dustin Carroll)<br></div><div dir='ltr'><br></div><div dir='ltr'><br></div><div dir='ltr'>----------------------------------------------------------------------<br></div><div dir='ltr'><br></div><div dir='ltr'>Message: 1<br></div><div dir='ltr'>Date: Fri, 20 Oct 2017 11:49:00 -0700<br></div><div dir='ltr'>From: Dustin Carroll <<a ymailto="mailto:dcarroll@uoregon.edu" href="mailto:dcarroll@uoregon.edu">dcarroll@uoregon.edu</a>><br></div><div dir='ltr'>To: <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a><br></div><div dir='ltr'>Subject: Re: [MITgcm-support] MITgcm-support Digest, Vol 172, Issue 5<br></div><div dir='ltr'>Message-ID: <<a ymailto="mailto:1FD1B54E-1B4F-4172-B5B3-2FDFEDD36E05@uoregon.edu" href="mailto:1FD1B54E-1B4F-4172-B5B3-2FDFEDD36E05@uoregon.edu">1FD1B54E-1B4F-4172-B5B3-2FDFEDD36E05@uoregon.edu</a>><br></div><div dir='ltr'>Content-Type: text/plain; charset="utf-8"<br></div><div dir='ltr'><br></div><div dir='ltr'>Hi Raheleh,<br></div><div dir='ltr'><br></div><div dir='ltr'>You can include multiple ptracers in your simulation by explicitly specifying the tracer names/initial files in your data.ptracers file,<br></div><div dir='ltr'><br></div><div dir='ltr'>e.g.,<br></div><div dir='ltr'><br></div><div dir='ltr'>PTRACERS_numInUse = 3,<br></div><div dir='ltr'><br></div><div dir='ltr'>PTRACERS_names(1) = ?tracer1',<br></div><div dir='ltr'>PTRACERS_names(2) = ?tracer2',<br></div><div dir='ltr'>PTRACERS_names(3) = ?tracer3?,<br></div><div dir='ltr'><br></div><div dir='ltr'>PTRACERS_initialFile(1)='tracer1.bin',<br></div><div dir='ltr'>PTRACERS_initialFile(2)='tracer2.bin',<br></div><div dir='ltr'>PTRACERS_initialFile(3)='tracer3.bin',<br></div><div dir='ltr'><br></div><div dir='ltr'>Post your data.ptracers file if you are still having trouble after trying this,<br></div><div dir='ltr'>Dustin<br></div><div dir='ltr'><br></div><div dir='ltr'><br></div><div dir='ltr'>> On Oct 20, 2017, at 11:38 AM, rahele shafiee <<a ymailto="mailto:rahele_shafiee@yahoo.com" href="mailto:rahele_shafiee@yahoo.com">rahele_shafiee@yahoo.com</a>> wrote:<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Hi everyone<br></div><div dir='ltr'>> I noticed that when the package (MNC) is active in the model, I can not introduce more than one tracer to my model and the error is as follows:<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> PTRACERS_MNC_INIT ERROR: PTRACERS_names( 2) is blank--please name it in 'data.ptracers'<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> How can I have more tracers with this package?<br></div><div dir='ltr'>> Thanks if you guide me<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Raheleh<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> On Wednesday, October 18, 2017, 4:47:25 PM GMT+3:30, <a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a> <<a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a>> wrote:<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Send MITgcm-support mailing list submissions to<br></div><div dir='ltr'>> <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> To subscribe or unsubscribe via the World Wide Web, visit<br></div><div dir='ltr'>> <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> or, via email, send a message with subject or body 'help' to<br></div><div dir='ltr'>> <a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> You can reach the person managing the list at<br></div><div dir='ltr'>> <a ymailto="mailto:mitgcm-support-owner@mitgcm.org" href="mailto:mitgcm-support-owner@mitgcm.org">mitgcm-support-owner@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support-owner@mitgcm.org" href="mailto:mitgcm-support-owner@mitgcm.org">mitgcm-support-owner@mitgcm.org</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> When replying, please edit your Subject line so it is more specific<br></div><div dir='ltr'>> than "Re: Contents of MITgcm-support digest..."<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Today's Topics:<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> 1. KPP parameters not read? (Donald Slater)<br></div><div dir='ltr'>> 2. Re: KPP parameters not read? (Dimitris Menemenlis)<br></div><div dir='ltr'>> 3. Re: KPP parameters not read? (Donald Slater)<br></div><div dir='ltr'>> 4. Re: KPP parameters not read? (Donald Slater)<br></div><div dir='ltr'>> 5. Number of tracers (rahele shafiee)<br></div><div dir='ltr'>> 6. Input of warm water in depth (Hadar Berman)<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ----------------------------------------------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Message: 1<br></div><div dir='ltr'>> Date: Tue, 17 Oct 2017 16:06:38 -0700<br></div><div dir='ltr'>> From: Donald Slater <<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a> <mailto:<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a>>><br></div><div dir='ltr'>> To: <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> Subject: [MITgcm-support] KPP parameters not read?<br></div><div dir='ltr'>> Message-ID: <<a ymailto="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu" href="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu">30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu</a> <mailto:<a ymailto="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu" href="mailto:30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu">30C1E94C-897D-458A-85A9-7E8D1A59C68B@ucsd.edu</a>>><br></div><div dir='ltr'>> Content-Type: text/plain; charset=utf-8<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Hi,<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> I am running some simulations with the KPP package enabled, but I think I have a strange problem reading parameters from data.kpp. I noticed this because I changed some parameters (difm0, difs0 and dift0) without having any effect on my simulation.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> The output stream from my simulation suggests that data.kpp is being read (i.e. I get the lines "KPP_INIT: opening data.kpp ? OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT: finished reading data.kpp?).<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> However if I try to trip the simulation up by inserting things which don?t make sense into data.kpp, for example setting "difm0 = Donald?, the simulation carries on as usual with the default value for difm0 and no error messages. In contrast, if I insert something silly into data.icefront (e.g. icefrontthetasurface = Donald), the simulation immediately stops. This suggests to me that somehow difm0 (and perhaps the other parameters in data.kpp) are not actually being read.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> This reminds me a little of another message on the support list (<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html " target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html </a><<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html" target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>). I?ve looked at kpp_readparms and compared it to similar files for other packages but can?t see anything amiss.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Has anyone experienced this or can offer any pointers as to what might be going on?<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Many thanks,<br></div><div dir='ltr'>> Donald<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Message: 2<br></div><div dir='ltr'>> Date: Tue, 17 Oct 2017 16:13:42 -0700<br></div><div dir='ltr'>> From: Dimitris Menemenlis <<a ymailto="mailto:dmenemenlis@gmail.com" href="mailto:dmenemenlis@gmail.com">dmenemenlis@gmail.com</a> <mailto:<a ymailto="mailto:dmenemenlis@gmail.com" href="mailto:dmenemenlis@gmail.com">dmenemenlis@gmail.com</a>>><br></div><div dir='ltr'>> To: MITgcm Support <<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>>><br></div><div dir='ltr'>> Subject: Re: [MITgcm-support] KPP parameters not read?<br></div><div dir='ltr'>> Message-ID: <<a ymailto="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com" href="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com">A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com</a> <mailto:<a ymailto="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com" href="mailto:A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com">A0031B95-0823-465D-A32C-D9D86D27BF57@gmail.com</a>>><br></div><div dir='ltr'>> Content-Type: text/plain; charset=utf-8<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Did you specify "useKPP=.TRUE." in data.pkg?<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> > On Oct 17, 2017, at 4:06 PM, Donald Slater <<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a> <mailto:<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a>>> wrote:<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > Hi,<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > I am running some simulations with the KPP package enabled, but I think I have a strange problem reading parameters from data.kpp. I noticed this because I changed some parameters (difm0, difs0 and dift0) without having any effect on my simulation.<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > The output stream from my simulation suggests that data.kpp is being read (i.e. I get the lines "KPP_INIT: opening data.kpp ? OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT: finished reading data.kpp?).<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > However if I try to trip the simulation up by inserting things which don?t make sense into data.kpp, for example setting "difm0 = Donald?, the simulation carries on as usual with the default value for difm0 and no error messages. In contrast, if I insert something silly into data.icefront (e.g. icefrontthetasurface = Donald), the simulation immediately stops. This suggests to me that somehow difm0 (and perhaps the other parameters in data.kpp) are not actually being read.<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > This reminds me a little of another message on the support list (<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html " target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html </a><<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html" target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>). I?ve looked at kpp_readparms and compared it to similar files for other packages but can?t see anything amiss.<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > Has anyone experienced this or can offer any pointers as to what might be going on?<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > Many thanks,<br></div><div dir='ltr'>> > Donald<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > _______________________________________________<br></div><div dir='ltr'>> > MITgcm-support mailing list<br></div><div dir='ltr'>> > <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> > <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Message: 3<br></div><div dir='ltr'>> Date: Tue, 17 Oct 2017 16:16:30 -0700<br></div><div dir='ltr'>> From: Donald Slater <<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a> <mailto:<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a>>><br></div><div dir='ltr'>> To: <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> Subject: Re: [MITgcm-support] KPP parameters not read?<br></div><div dir='ltr'>> Message-ID: <<a ymailto="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu" href="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu">BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu</a> <mailto:<a ymailto="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu" href="mailto:BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu">BC936799-41BC-4BBA-AEE6-55D166FAECB5@ucsd.edu</a>>><br></div><div dir='ltr'>> Content-Type: text/plain; charset=utf-8<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Hi,<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Yes I did. Sorry I should have specified that. I also know that KPP is running because I?ve got the diagnostic KPPviscA printing out and it gives me variable vertical viscosity as expected for KPP under the default parameters.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Donald<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> > On Oct 17, 2017, at 4:13 PM, Dimitris Menemenlis <<a ymailto="mailto:dmenemenlis@gmail.com" href="mailto:dmenemenlis@gmail.com">dmenemenlis@gmail.com</a> <mailto:<a ymailto="mailto:dmenemenlis@gmail.com" href="mailto:dmenemenlis@gmail.com">dmenemenlis@gmail.com</a>>> wrote:<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > Did you specify "useKPP=.TRUE." in data.pkg?<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> >> On Oct 17, 2017, at 4:06 PM, Donald Slater <<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a> <mailto:<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a>>> wrote:<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> Hi,<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> I am running some simulations with the KPP package enabled, but I think I have a strange problem reading parameters from data.kpp. I noticed this because I changed some parameters (difm0, difs0 and dift0) without having any effect on my simulation.<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> The output stream from my simulation suggests that data.kpp is being read (i.e. I get the lines "KPP_INIT: opening data.kpp ? OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT: finished reading data.kpp?).<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> However if I try to trip the simulation up by inserting things which don?t make sense into data.kpp, for example setting "difm0 = Donald?, the simulation carries on as usual with the default value for difm0 and no error messages. In contrast, if I insert something silly into data.icefront (e.g. icefrontthetasurface = Donald), the simulation immediately stops. This suggests to me that somehow difm0 (and perhaps the other parameters in data.kpp) are not actually being read.<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> This reminds me a little of another message on the support list (<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html " target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html </a><<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html" target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>). I?ve looked at kpp_readparms and compared it to similar files for other packages but can?t see anything amiss.<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> Has anyone experienced this or can offer any pointers as to what might be going on?<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> Many thanks,<br></div><div dir='ltr'>> >> Donald<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> _______________________________________________<br></div><div dir='ltr'>> >> MITgcm-support mailing list<br></div><div dir='ltr'>> >> <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> >> <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > _______________________________________________<br></div><div dir='ltr'>> > MITgcm-support mailing list<br></div><div dir='ltr'>> > <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> > <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Message: 4<br></div><div dir='ltr'>> Date: Tue, 17 Oct 2017 16:45:11 -0700<br></div><div dir='ltr'>> From: Donald Slater <<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a> <mailto:<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a>>><br></div><div dir='ltr'>> To: <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> Subject: Re: [MITgcm-support] KPP parameters not read?<br></div><div dir='ltr'>> Message-ID: <<a ymailto="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu" href="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu">C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu</a> <mailto:<a ymailto="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu" href="mailto:C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu">C06668E6-823F-4DF4-9142-1C08C145501F@ucsd.edu</a>>><br></div><div dir='ltr'>> Content-Type: text/plain; charset=utf-8<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Just to clarify, as in retrospect my previous email was a little confusing.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> I do have "useKPP=.TRUE." in data.pkg. And I know KPP is running because I get the expected variable vertical viscosity when I print out the relevant diagnostic.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> But I still have the issue with the simulation appearing to ignore the parameters in data.kpp<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Thanks,<br></div><div dir='ltr'>> Donald<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> > On Oct 17, 2017, at 4:13 PM, Dimitris Menemenlis <<a ymailto="mailto:dmenemenlis@gmail.com" href="mailto:dmenemenlis@gmail.com">dmenemenlis@gmail.com</a> <mailto:<a ymailto="mailto:dmenemenlis@gmail.com" href="mailto:dmenemenlis@gmail.com">dmenemenlis@gmail.com</a>>> wrote:<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > Did you specify "useKPP=.TRUE." in data.pkg?<br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> >> On Oct 17, 2017, at 4:06 PM, Donald Slater <<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a> <mailto:<a ymailto="mailto:daslater@ucsd.edu" href="mailto:daslater@ucsd.edu">daslater@ucsd.edu</a>>> wrote:<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> Hi,<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> I am running some simulations with the KPP package enabled, but I think I have a strange problem reading parameters from data.kpp. I noticed this because I changed some parameters (difm0, difs0 and dift0) without having any effect on my simulation.<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> The output stream from my simulation suggests that data.kpp is being read (i.e. I get the lines "KPP_INIT: opening data.kpp ? OPEN_COPY_DATA_FILE: opening file data.kpp ... KPP_INIT: finished reading data.kpp?).<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> However if I try to trip the simulation up by inserting things which don?t make sense into data.kpp, for example setting "difm0 = Donald?, the simulation carries on as usual with the default value for difm0 and no error messages. In contrast, if I insert something silly into data.icefront (e.g. icefrontthetasurface = Donald), the simulation immediately stops. This suggests to me that somehow difm0 (and perhaps the other parameters in data.kpp) are not actually being read.<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> This reminds me a little of another message on the support list (<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html " target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html </a><<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html" target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/2005-July/003245.html</a>>). I?ve looked at kpp_readparms and compared it to similar files for other packages but can?t see anything amiss.<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> Has anyone experienced this or can offer any pointers as to what might be going on?<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> Many thanks,<br></div><div dir='ltr'>> >> Donald<br></div><div dir='ltr'>> >> <br></div><div dir='ltr'>> >> _______________________________________________<br></div><div dir='ltr'>> >> MITgcm-support mailing list<br></div><div dir='ltr'>> >> <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> >> <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> > <br></div><div dir='ltr'>> > _______________________________________________<br></div><div dir='ltr'>> > MITgcm-support mailing list<br></div><div dir='ltr'>> > <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> > <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Message: 5<br></div><div dir='ltr'>> Date: Wed, 18 Oct 2017 08:16:17 +0000 (UTC)<br></div><div dir='ltr'>> From: rahele shafiee <<a ymailto="mailto:rahele_shafiee@yahoo.com" href="mailto:rahele_shafiee@yahoo.com">rahele_shafiee@yahoo.com</a> <mailto:<a ymailto="mailto:rahele_shafiee@yahoo.com" href="mailto:rahele_shafiee@yahoo.com">rahele_shafiee@yahoo.com</a>>><br></div><div dir='ltr'>> To: MITgcm Support <<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>>>,<br></div><div dir='ltr'>> "<a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a>>"<br></div><div dir='ltr'>> <<a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support-request@mitgcm.org" href="mailto:mitgcm-support-request@mitgcm.org">mitgcm-support-request@mitgcm.org</a>>><br></div><div dir='ltr'>> Subject: [MITgcm-support] Number of tracers<br></div><div dir='ltr'>> Message-ID: <<a ymailto="mailto:967454873.90466.1508314577675@mail.yahoo.com" href="mailto:967454873.90466.1508314577675@mail.yahoo.com">967454873.90466.1508314577675@mail.yahoo.com</a> <mailto:<a ymailto="mailto:967454873.90466.1508314577675@mail.yahoo.com" href="mailto:967454873.90466.1508314577675@mail.yahoo.com">967454873.90466.1508314577675@mail.yahoo.com</a>>><br></div><div dir='ltr'>> Content-Type: text/plain; charset="utf-8"<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Hi every oneI want to add two tracers to my model. I set in the PTRACERS_SIZE.hthe number of tracers and set the data.ptracers file for tracers. When thenumber of my tracers is 1, I have no problem in running the model, but with theaddition of the number of tracers, the model gives an error: (PTRACERS_MNC_INIT ERROR: PTRACERS_names(? 2) is blank--please name it in 'data.ptracers')? While tracer name 2 is not blank. Do I need othersettings?Best ragard?Raheleh<br></div><div dir='ltr'>> -------------- next part --------------<br></div><div dir='ltr'>> An HTML attachment was scrubbed...<br></div><div dir='ltr'>> URL: <<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20171018/46d0eb69/attachment-0001.html " target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20171018/46d0eb69/attachment-0001.html </a><<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20171018/46d0eb69/attachment-0001.html" target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20171018/46d0eb69/attachment-0001.html</a>>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Message: 6<br></div><div dir='ltr'>> Date: Wed, 18 Oct 2017 16:16:56 +0300<br></div><div dir='ltr'>> From: Hadar Berman <<a ymailto="mailto:hadarberman@gmail.com" href="mailto:hadarberman@gmail.com">hadarberman@gmail.com</a> <mailto:<a ymailto="mailto:hadarberman@gmail.com" href="mailto:hadarberman@gmail.com">hadarberman@gmail.com</a>>><br></div><div dir='ltr'>> To: <a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:mitgcm-support@mitgcm.org" href="mailto:mitgcm-support@mitgcm.org">mitgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> Subject: [MITgcm-support] Input of warm water in depth<br></div><div dir='ltr'>> Message-ID: <<a ymailto="mailto:710EFCB9-41E3-44B0-AA3C-D30624FF888A@gmail.com" href="mailto:710EFCB9-41E3-44B0-AA3C-D30624FF888A@gmail.com">710EFCB9-41E3-44B0-AA3C-D30624FF888A@gmail.com</a> <mailto:<a ymailto="mailto:710EFCB9-41E3-44B0-AA3C-D30624FF888A@gmail.com" href="mailto:710EFCB9-41E3-44B0-AA3C-D30624FF888A@gmail.com">710EFCB9-41E3-44B0-AA3C-D30624FF888A@gmail.com</a>>><br></div><div dir='ltr'>> Content-Type: text/plain; charset=us-ascii<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Dear all,<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> I am using the MITgcm with specified heat and water fluxes and relaxation for the region of the Gulf of Elat. <br></div><div dir='ltr'>> I would like to check how an input of warmer water entering in different depths from the boundary can effect the surrounding water. <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> I have tried using the obcs pkg, but specifying the temperature in the boundary seems to have a higher effect then should be, and it is not correlated with the discharge (or velocities) entering though the boundary (even when specifying velocities of zero, I still see a great effect due to the temperature of the boundary). <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> As far as I can tell, since I need to check the effect of the water entering in differing depths (and not only on the surface), I can not use the surface forcing via evaporation minus precipitation (EmPmRFile) or the external forcing package (runoffFile). <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Any ideas?<br></div><div dir='ltr'>> Thanks,<br></div><div dir='ltr'>> Hadar Berman.<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> Subject: Digest Footer<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> _______________________________________________<br></div><div dir='ltr'>> MITgcm-support mailing list<br></div><div dir='ltr'>> <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a> <mailto:<a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a>><br></div><div dir='ltr'>> <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support " target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support </a><<a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a>><br></div><div dir='ltr'>> <br></div><div dir='ltr'>> <br></div><div dir='ltr'>> ------------------------------<br></div><div dir='ltr'>> <br></div><div dir='ltr'>> End of MITgcm-support Digest, Vol 172, Issue 5<br></div><div dir='ltr'>> **********************************************<br></div><div dir='ltr'>> _______________________________________________<br></div><div dir='ltr'>> MITgcm-support mailing list<br></div><div dir='ltr'>> <a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a><br></div><div dir='ltr'>> <a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a><br></div><div dir='ltr'><br></div><div dir='ltr'>-------------- next part --------------<br></div><div dir='ltr'>An HTML attachment was scrubbed...<br></div><div dir='ltr'>URL: <<a href="http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20171020/a0b2ead7/attachment.html" target=_blank>http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20171020/a0b2ead7/attachment.html</a>><br></div><div dir='ltr'><br></div><div dir='ltr'>------------------------------<br></div><div dir='ltr'><br></div><div dir='ltr'>Subject: Digest Footer<br></div><div dir='ltr'><br></div><div dir='ltr'>_______________________________________________<br></div><div dir='ltr'>MITgcm-support mailing list<br></div><div dir='ltr'><a ymailto="mailto:MITgcm-support@mitgcm.org" href="mailto:MITgcm-support@mitgcm.org">MITgcm-support@mitgcm.org</a><br></div><div dir='ltr'><a href="http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support" target=_blank>http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support</a><br></div><div dir='ltr'><br></div><div dir='ltr'><br></div><div dir='ltr'>------------------------------<br></div><div dir='ltr'><br></div><div dir='ltr'>End of MITgcm-support Digest, Vol 172, Issue 9<br></div><div dir='ltr'>**********************************************<br></div></div>
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