[MITgcm-support] Interpolation issue: wet grid-pts with theta=0 identically
Matthew Mazloff
mmazloff at ucsd.edu
Mon Jun 9 13:06:40 EDT 2025
Hello
You can see which are wet points as they will have
hFacC>0
in the high-res.
Matt
> On Jun 9, 2025, at 10:04 AM, Archie Zhang <zjcxiaobai at gmail.com> wrote:
>
> Hi matt,
>
> Thank you for your response,
> I am new to MITgcm, could you explain more about how to extrapolate to the wet grid-pts? how can I get the position of the wet grid-pts?
>
> In my simulation, I only did the extrapolation in horizontal, since I only want to increase the horizontal resolution.
>
> Thank you !
>
> On Mon, Jun 9, 2025 at 12:59 PM Matthew Mazloff <mmazloff at ucsd.edu <mailto:mmazloff at ucsd.edu>> wrote:
>> You need to extrapolate the T and S to all wet points.
>> I usually extrapolate in the vertical first, and then the horizontal.
>>
>> You don’t want ICs with T=S=0 in your run.
>>
>> Matt
>>
>>
>>> On Jun 9, 2025, at 9:49 AM, Juncheng Zhang <juncheng.zhang at mail.utoronto.ca <mailto:juncheng.zhang at mail.utoronto.ca>> wrote:
>>>
>>> Dear all,
>>>
>>> I am using MITgcm to run a 1km high-resolution simulation based on the tutorial reentrant channel,
>>> I first run a 5 km simulation, then use the output of 5km run as the initial condition of my 1km run,
>>> However, after I did the interpolation of 5 km output, and run the model, the error said below:
>>>
>>> (PID.TID 0000.0001) *** ERROR *** INI_THETA: found 2891 wet grid-pts with theta=0 identically.
>>> (PID.TID 0000.0001) *** ERROR *** If this is intentional, you need to set checkIniTemp=.FALSE. in "data", namelist PARM05
>>>
>>> I know wet grid-pts relates to the parameter hFac? But I don’t know how to fix it,
>>>
>>> And I tried to ignore this error by adding checkIniTemp=.FALSE., however, the simulation is not stable, and I had weird numerical artifacts appearing.
>>>
>>> Thank you in advance, I appreciate any help.
>>>
>>>
>>>
>>> Kind Regards
>>>
>>> Juncheng Zhang
>>> PhD Student,
>>>
>>> Earth, Atmospheric, and Planetary Physics
>>>
>>> Department of Physics
>>> University of Toronto
>>> McLennan Physical Laboratories
>>> 60 St Gorge St
>>> Toronto, Ontario, M5S 1A7
>>>
>>> juncheng.zhang at mail.utoronto.ca <mailto:juncheng.zhang at mail.utoronto.ca>
>>>
>>> <image001.jpg> <https://urldefense.com/v3/__https://www.physics.utoronto.ca/__;!!Mih3wA!HNDUCNXhxG6MrF8lwCidyXH6k9D5I1559lhoKL_x2Ny6m-3mu3lV5LVhng9IgTLUp1kzdf1ZaHGJ0Gy3Xs9pze8eihBDFwmX_g$>
>>>
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