[MITgcm-support] MITgcm-support Digest, Vol 254, Issue 19
Mochamad Firman Ghazali
afghazali25 at gmail.com
Thu Aug 22 02:47:24 EDT 2024
Recently, I have been following the instructions provided in
MITgcm_on_Ubuntu.txt
, especially in lines 16-18, I obtained the result as displayed in the
picture below. I guess that if the steps in lines 16-18 worked fine, I
should see the message # Start time: ..... and # End time: ...... The
picture below provided me with time information. Does the machine work
properly?
[image: image.png]
and this is the result, after running the lines 27-44.
[image: image.png]
However, I don't understand how to modify the SIZE.h.
Many thanks,
Firman Ghazali.
Pada Sel, 20 Agu 2024 pukul 18.53 <mitgcm-support-request at mitgcm.org>
menulis:
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> 1. Ask for MITgcm optfile and generating "make"
> (Mochamad Firman Ghazali)
> 2. Re: [EXTERNAL] Ask for MITgcm optfile and generating "make"
> (Menemenlis, Dimitris (US 329B))
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Tue, 20 Aug 2024 18:06:53 +0700
> From: Mochamad Firman Ghazali <afghazali25 at gmail.com>
> To: mitgcm-support at mitgcm.org
> Subject: [MITgcm-support] Ask for MITgcm optfile and generating "make"
> Message-ID:
> <
> CAMKifyjtaEacW4ikU39emGZvT6LnGm-KL-dJQ8NDhtiEvOsSxA at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Dear MITgcm team,
>
> I am Firman Ghazali. I just started to learn ocean numerical modelling, my
> background is in remote sensing. I am interested in learning and using
> MITgcm. I have tried to install the MITgcm under my Windows subsystem linux
> (WSL) on my Windows 10, AMD Ryzen 7, AMD Radeon graphic, and 16GB of RAM.
>
>
> 1. The installation process was successfully completed. However, I
> encountered an issue when completing the opt file. I found it difficult
> to
> select suitable content for the opt file in the tools/build_options
> directory. Therefore, I would like to ask for help to solve this issue.
> 2. After googling, I found the example of the optfile that suit with my
> laptop (I guess) from
>
> https://www.coaps.fsu.edu/pub/taylor/haibo_sim_011421/MITgcm/tools/suggest_optfile_names
> .
> I am not sure, but it worked then the following error comes after
> activating the "make depend" and "make"
>
> /home/firmanghazali/MITgcm/tools/cyrus-imapd-makedepend/makedepend:
> warning: all_proc_die.F (reading EESUPPORT.h, line 173): cannot find
> include file "mpif.h"
> not in mpif.h
> not in mpif.h
> not in ./mpif.h
> not in /usr/lib/gcc/x86_64-linux-gnu/11/include/mpif.h
> not in /usr/local/include/mpif.h
> not in /usr/include/x86_64-linux-gnu/mpif.h
> not in /usr/include/mpif.h
> not in /usr/include/mpif.h
> /home/firmanghazali/MITgcm/tools/f90mkdepend >> Makefile
>
> and
>
> Update AD_CONFIG.h and make ./mitgcmuv
> make -f Makefile ./mitgcmuv
> make[1]: Entering directory '/home/firmanghazali'
> f77 -c chksum_tiled.f
> chksum_tiled.f:434:4:
>
> 434 | These lines are here to deliberately cause a compile-time error.
> | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:435:4:
> 435 | If you see these lines in your .F files or the compiler shows
> them | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:436:4:
> 436 | as an error then it means you have not placed your configuration
> | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:437:4:
> 437 | files in the appropriate place. | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:438:4:
> 438 | You need to place you own copy of SIZE.h in the include |
> 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:439:4:
> 439 | path for the model, and comment out these lines. | 1
> Error: Non-numeric character in statement label at (1)
> make[1]: *** [Makefile:1224: chksum_tiled.o] Error 1
> make[1]: Leaving directory '/home/firmanghazali'
> make: *** [Makefile:1136: fwd_exe_target] Error 2
>
>
> Many thanks,
> Firman Ghazali
>
> --
>
> *Mochamad Firman Ghazali, S. Pd., M. T.*
> (Environmental Remote Sensing)
> Department of Geodesy and Geomatics
> Faculty of Engineering, University of Lampung
> *======================================*
>
> *Associate Researcher *
>
> *Center for Remote Sensing, Bandung Institute of Technology*
> *+62 821 2193 5513*
> *======================================*
> *Sinta ID = 6679166Google Scholar ID = lzTlSHkAAAAJScopus ID =
> 57210807769ORCID iD = https://orcid.org/0000-0003-1716-4063
> <https://orcid.org/0000-0003-1716-4063> *
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> ------------------------------
>
> Message: 2
> Date: Tue, 20 Aug 2024 11:52:32 +0000
> From: "Menemenlis, Dimitris (US 329B)"
> <dimitris.menemenlis at jpl.nasa.gov>
> To: MITgcm Support <mitgcm-support at mitgcm.org>
> Subject: Re: [MITgcm-support] [EXTERNAL] Ask for MITgcm optfile and
> generating "make"
> Message-ID: <898AAA22-B6CA-4821-B20C-E362D7ECBB94 at jpl.nasa.gov>
> Content-Type: text/plain; charset="utf-8"
>
> Hi Firman, maybe these will be useful to you:
> https://github.com/coessing/coessing-mitgcm-2023/tree/main/doc
>
> In particular look at Ubuntu_on_Windows.txt and MITgcm_on_Ubuntu.txt
>
> For 1, the optfile should be selected automatically.
>
> For 2a, you need to specify location of your MPI include directory.
>
> For 2b, you need to modify SIZE.h
>
> If you follow instructions in documents above, it should work ? if not,
> please let me know and I will adjust.
>
> Cheers, Dimitris
>
>
> On Aug 20, 2024, at 4:06?AM, Mochamad Firman Ghazali <
> afghazali25 at gmail.com> wrote:
>
> Dear MITgcm team,
>
> I am Firman Ghazali. I just started to learn ocean numerical modelling, my
> background is in remote sensing. I am interested in learning and using
> MITgcm. I have tried to install the MITgcm under my Windows subsystem linux
> (WSL) on my Windows 10, AMD Ryzen 7, AMD Radeon graphic, and 16GB of RAM.
>
>
> 1. The installation process was successfully completed. However, I
> encountered an issue when completing the opt file. I found it difficult to
> select suitable content for the opt file in the tools/build_options
> directory. Therefore, I would like to ask for help to solve this issue.
> 2. After googling, I found the example of the optfile that suit with my
> laptop (I guess) from
> https://www.coaps.fsu.edu/pub/taylor/haibo_sim_011421/MITgcm/tools/suggest_optfile_names
> <
> https://urldefense.us/v3/__https://www.coaps.fsu.edu/pub/taylor/haibo_sim_011421/MITgcm/tools/suggest_optfile_names__;!!PvBDto6Hs4WbVuu7!N5bbYoWXLvmUr56TC1repC48OONvP7KNblSiaWThc8e90vHeqv8UHR4zXsXpTaBwK4uYQa5Py9x1sQo371feoAoY5277bxtk$>.
> I am not sure, but it worked then the following error comes after
> activating the "make depend" and "make"
>
> /home/firmanghazali/MITgcm/tools/cyrus-imapd-makedepend/makedepend:
> warning: all_proc_die.F (reading EESUPPORT.h, line 173): cannot find
> include file "mpif.h"
> not in mpif.h
> not in mpif.h
> not in ./mpif.h
> not in /usr/lib/gcc/x86_64-linux-gnu/11/include/mpif.h
> not in /usr/local/include/mpif.h
> not in /usr/include/x86_64-linux-gnu/mpif.h
> not in /usr/include/mpif.h
> not in /usr/include/mpif.h
> /home/firmanghazali/MITgcm/tools/f90mkdepend >> Makefile
>
> and
>
> Update AD_CONFIG.h and make ./mitgcmuv
> make -f Makefile ./mitgcmuv
> make[1]: Entering directory '/home/firmanghazali'
> f77 -c chksum_tiled.f
> chksum_tiled.f:434:4:
>
> 434 | These lines are here to deliberately cause a compile-time
> error. | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:435:4:
> 435 | If you see these lines in your .F files or the compiler shows
> them | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:436:4:
> 436 | as an error then it means you have not placed your
> configuration | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:437:4:
> 437 | files in the appropriate place. | 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:438:4:
> 438 | You need to place you own copy of SIZE.h in the include |
> 1
> Error: Non-numeric character in statement label at (1)
> chksum_tiled.f:439:4:
> 439 | path for the model, and comment out these lines. | 1
> Error: Non-numeric character in statement label at (1)
> make[1]: *** [Makefile:1224: chksum_tiled.o] Error 1
> make[1]: Leaving directory '/home/firmanghazali'
> make: *** [Makefile:1136: fwd_exe_target] Error 2
>
>
> Many thanks,
> Firman Ghazali
>
> --
> Mochamad Firman Ghazali, S. Pd., M. T.
> (Environmental Remote Sensing)
> Department of Geodesy and Geomatics
> Faculty of Engineering, University of Lampung
> ======================================
> Associate Researcher
> Center for Remote Sensing, Bandung Institute of Technology
> +62 821 2193 5513
> ======================================
> Sinta ID = 6679166
> Google Scholar ID = lzTlSHkAAAAJ
> Scopus ID = 57210807769
> ORCID iD = https://orcid.org/0000-0003-1716-4063<
> https://urldefense.us/v3/__https://orcid.org/0000-0003-1716-4063__;!!PvBDto6Hs4WbVuu7!N5bbYoWXLvmUr56TC1repC48OONvP7KNblSiaWThc8e90vHeqv8UHR4zXsXpTaBwK4uYQa5Py9x1sQo371feoAoY551jb4G9$
> >
> _______________________________________________
> MITgcm-support mailing list
> MITgcm-support at mitgcm.org
>
> https://urldefense.us/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!N5bbYoWXLvmUr56TC1repC48OONvP7KNblSiaWThc8e90vHeqv8UHR4zXsXpTaBwK4uYQa5Py9x1sQo371feoAoY5w6rFRan$
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> End of MITgcm-support Digest, Vol 254, Issue 19
> ***********************************************
>
--
*Mochamad Firman Ghazali, S. Pd., M. T.*
(Environmental Remote Sensing)
Department of Geodesy and Geomatics
Faculty of Engineering, University of Lampung
*======================================*
*Associate Researcher *
*Center for Remote Sensing, Bandung Institute of Technology*
*+62 821 2193 5513*
*======================================*
*Sinta ID = 6679166Google Scholar ID = lzTlSHkAAAAJScopus ID =
57210807769ORCID iD = https://orcid.org/0000-0003-1716-4063
<https://orcid.org/0000-0003-1716-4063> *
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