[MITgcm-support] ADJ* missing

mario wrk wrkmario at gmail.com
Sat Mar 4 11:56:10 EST 2023


Thank you Matt,
you are right!!!! embarrassed to realize there is a period . missing in
adjDumpFreq
many thanks,
Mario

On Sat, Mar 4, 2023 at 7:47 PM mario wrk <wrkmario at gmail.com> wrote:

> Yes, adjDumpFreq is correct.
> there is  a warming by the way, not sure if relevant.
> $ cat STDERR.0000
> (PID.TID 0000.0001) ** WARNING ** CTRL_CHECK: relying on mdsio_gl.F to
> pack/unpack the controlvector is unsafe when useSingleCpuIO is true.
>
> Thanks,
> Mario
>
>
> On Sat, Mar 4, 2023 at 7:43 PM <mitgcm-support-request at mitgcm.org> wrote:
>
>> Send MITgcm-support mailing list submissions to
>>         mitgcm-support at mitgcm.org
>>
>> To subscribe or unsubscribe via the World Wide Web, visit
>>         http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
>> or, via email, send a message with subject or body 'help' to
>>         mitgcm-support-request at mitgcm.org
>>
>> You can reach the person managing the list at
>>         mitgcm-support-owner at mitgcm.org
>>
>> When replying, please edit your Subject line so it is more specific
>> than "Re: Contents of MITgcm-support digest..."
>>
>>
>> Today's Topics:
>>
>>    1. Re: MITgcm-support Digest, Vol 237, Issue 4 (Matthew Mazloff)
>>
>>
>> ----------------------------------------------------------------------
>>
>> Message: 1
>> Date: Sat, 4 Mar 2023 08:42:19 -0800
>> From: Matthew Mazloff <mmazloff at ucsd.edu>
>> To: mitgcm-support at mitgcm.org
>> Subject: Re: [MITgcm-support] MITgcm-support Digest, Vol 237, Issue 4
>> Message-ID: <A837D383-CAB2-4C9C-BE3C-C7A2DEB197C4 at ucsd.edu>
>> Content-Type: text/plain; charset="utf-8"
>>
>> you have to set
>> adjDumpFreq
>> to what you want in the data file.
>> Have you done this?
>>
>> Matt
>>
>>
>> > On Mar 4, 2023, at 8:24 AM, mario wrk <wrkmario at gmail.com> wrote:
>> >
>> > Thank you all. The error was fixed by adding a command in runtime
>> > limit stacksize unlimited
>> >
>> > Yet a new question arises, as I was executing *mitgcmuv_ad*, in the
>> end, it was NORMAL END, with no errors, I got forward states and even some
>> cost function outputs,  but ADJ* files are missing,  which means something
>> is still missing in runtime? Has anyone ever met this situation?
>> >
>> > many thanks,
>> > Mario
>> >
>> >
>> >
>> > On Sat, Mar 4, 2023 at 5:11?PM <mitgcm-support-request at mitgcm.org
>> <mailto:mitgcm-support-request at mitgcm.org>> wrote:
>> >> Send MITgcm-support mailing list submissions to
>> >>         mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>
>> >>
>> >> To subscribe or unsubscribe via the World Wide Web, visit
>> >>         http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HeVji0WA$
>> >
>> >> or, via email, send a message with subject or body 'help' to
>> >>         mitgcm-support-request at mitgcm.org <mailto:
>> mitgcm-support-request at mitgcm.org>
>> >>
>> >> You can reach the person managing the list at
>> >>         mitgcm-support-owner at mitgcm.org <mailto:
>> mitgcm-support-owner at mitgcm.org>
>> >>
>> >> When replying, please edit your Subject line so it is more specific
>> >> than "Re: Contents of MITgcm-support digest..."
>> >>
>> >>
>> >> Today's Topics:
>> >>
>> >>    1. Re: [EXTERNAL] Re:  MITgcm-support Digest, Vol 237, Issue 1
>> >>       (Menemenlis, Dimitris (US 329B))
>> >>
>> >>
>> >> ----------------------------------------------------------------------
>> >>
>> >> Message: 1
>> >> Date: Sat, 4 Mar 2023 14:10:39 +0000
>> >> From: "Menemenlis, Dimitris (US 329B)"
>> >>         <dimitris.menemenlis at jpl.nasa.gov <mailto:
>> dimitris.menemenlis at jpl.nasa.gov>>
>> >> To: "mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>" <
>> mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>>
>> >> Subject: Re: [MITgcm-support] [EXTERNAL] Re:  MITgcm-support Digest,
>> >>         Vol 237, Issue 1
>> >> Message-ID: <16168F0C-E11C-428D-B108-9AFD9F27604F at jpl.nasa.gov
>> <mailto:16168F0C-E11C-428D-B108-9AFD9F27604F at jpl.nasa.gov>>
>> >> Content-Type: text/plain; charset="utf-8"
>> >>
>> >> Perhaps try compiling without optimization to see if issue remains?
>> >>
>> >> On Mar 3, 2023, at 4:15 PM, mario wrk <wrkmario at gmail.com <mailto:
>> wrkmario at gmail.com>> wrote:
>> >>
>> >> ?
>> >> Thanks for pointing that out!  the scratch files point to data.exch2
>> and data.ctrl  I excluded some pkg one by one, but I still have some
>> similar issues,
>> >> in the end, there is a segmentation fault, srun: error: l10551: task
>> 256: Segmentation fault, now I highly suspect it might be some compiler
>> issues, cuz it was good with some verification examples, but my own
>> configuration substantially increased resolution and I wanted to
>> compile/run in multi-processors
>> >> I also noticed there were similar discussions before:
>> http://mailman.mitgcm.org/pipermail/mitgcm-support/2018-June/011593.html
>> <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/2018-June/011593.html__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0E9GaEv5w$
>> ><
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/2018-June/011593.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKaxKv-vC$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/pipermail/mitgcm-support/2018-June/011593.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKaxKv-vC$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Hh_vWFAQ$
>> >>
>> >>
>> >> Best,
>> >> Mario
>> >>
>> >>  255: forrtl: severe (28): CLOSE error, unit 11, file "Unknown"
>> >>  255: Image              PC                Routine            Line
>>     Source
>> >>  255: libifcoremt.so.5   00001555553EFBDE  for__exit_handler
>>  Unknown  Unknown
>> >>  255: libifcoremt.so.5   00001555553FC78E  for__signal_handl
>>  Unknown  Unknown
>> >>  255: libpthread-2.28.s  0000155550C3BC20  Unknown
>>  Unknown  Unknown
>> >>  255: libc-2.28.so <
>> https://urldefense.com/v3/__http://libc-2.28.so__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eh0fxt6g$
>> ><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4ppnZWw$>>
>>      000015555095316B  unlink                Unknown  Unknown
>> >>  255: libifcoremt.so.5   00001555553E18B1  for__close_proc
>>  Unknown  Unknown
>> >>  255: libifcoremt.so.5   00001555553E0EB0  for_close
>>  Unknown  Unknown
>> >>  255: mitgcmuv_ad        0000000000902A3F  Unknown
>>  Unknown  Unknown
>> >>  255: mitgcmuv_ad        00000000009E2F4A  Unknown
>>  Unknown  Unknown
>> >>  255: mitgcmuv_ad        00000000009DB0E5  Unknown
>>  Unknown  Unknown
>> >>  255: mitgcmuv_ad        00000000009F7D38  Unknown
>>  Unknown  Unknown
>> >>  255: mitgcmuv_ad        000000000097DDEA  Unknown
>>  Unknown  Unknown
>> >>  714: mitgcmuv_ad        0000000000403852  Unknown
>>  Unknown  Unknown
>> >>  714: libc-2.28.so <
>> https://urldefense.com/v3/__http://libc-2.28.so__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eh0fxt6g$
>> ><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4ppnZWw$>>
>>      0000155550887493  __libc_start_main     Unknown  Unknown
>> >>  714: mitgcmuv_ad        000000000040375E  Unknown
>>  Unknown  Unknown
>> >>  255: mitgcmuv_ad        0000000000403852  Unknown
>>  Unknown  Unknown
>> >>  255: libc-2.28.so <
>> https://urldefense.com/v3/__http://libc-2.28.so__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eh0fxt6g$
>> ><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4ppnZWw$>>
>>      0000155550887493  __libc_start_main     Unknown  Unknown
>> >>  255: mitgcmuv_ad        000000000040375E  Unknown
>>  Unknown  Unknown
>> >> 1481: forrtl: error (78): process killed (SIGTERM)
>> >> 1481: Image              PC                Routine            Line
>>     Source
>> >> 1481: libifcoremt.so.5   00001555553FC76C  for__signal_handl
>>  Unknown  Unknown
>> >> 1481: libpthread-2.28.s  0000155550C3BC20  Unknown
>>  Unknown  Unknown
>> >> 1481: libpthread-2.28.s  0000155550C3B1D6  __open64
>> Unknown  Unknown
>> >> 1481: libifcoremt.so.5   00001555554911B1  for__open_proc
>> Unknown  Unknown
>> >> 1481: libifcoremt.so.5   000015555540CCBE  for_open
>> Unknown  Unknown
>> >> 1481: mitgcmuv_ad        000000000097F1F5  Unknown
>>  Unknown  Unknown
>> >> 1481: mitgcmuv_ad        000000000090122F  Unknown
>>  Unknown  Unknown
>> >> 1481: mitgcmuv_ad        00000000009E2F4A  Unknown
>>  Unknown  Unknown
>> >> 1481: mitgcmuv_ad        00000000009DB0E5  Unknown
>>  Unknown  Unknown
>> >> 1481: mitgcmuv_ad        00000000009F7D38  Unknown
>>  Unknown  Unknown
>> >> 1481: mitgcmuv_ad        000000000097DDEA  Unknown
>>  Unknown  Unknown
>> >>
>> >> On Fri, Mar 3, 2023 at 6:35?PM <mitgcm-support-request at mitgcm.org
>> <mailto:mitgcm-support-request at mitgcm.org><mailto:
>> mitgcm-support-request at mitgcm.org <mailto:
>> mitgcm-support-request at mitgcm.org>>> wrote:
>> >> Send MITgcm-support mailing list submissions to
>> >>         mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org
>> ><mailto:mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>>
>> >>
>> >> To subscribe or unsubscribe via the World Wide Web, visit
>> >>         http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HeVji0WA$
>> ><
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKcuWvN_K$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKcuWvN_K$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H-S3PAwg$
>> >>
>> >> or, via email, send a message with subject or body 'help' to
>> >>         mitgcm-support-request at mitgcm.org <mailto:
>> mitgcm-support-request at mitgcm.org><mailto:
>> mitgcm-support-request at mitgcm.org <mailto:
>> mitgcm-support-request at mitgcm.org>>
>> >>
>> >> You can reach the person managing the list at
>> >>         mitgcm-support-owner at mitgcm.org <mailto:
>> mitgcm-support-owner at mitgcm.org><mailto:mitgcm-support-owner at mitgcm.org
>> <mailto:mitgcm-support-owner at mitgcm.org>>
>> >>
>> >> When replying, please edit your Subject line so it is more specific
>> >> than "Re: Contents of MITgcm-support digest..."
>> >>
>> >>
>> >> Today's Topics:
>> >>
>> >>    1. too many values for NAMELIST variable (mario wrk)
>> >>    2. Re: too many values for NAMELIST variable
>> >>       (Menemenlis, Dimitris (US 329B))
>> >>    3. Re: too many values for NAMELIST variable
>> >>       (Carroll, Dustin (US 329C-Affiliate))
>> >>
>> >>
>> >> ----------------------------------------------------------------------
>> >>
>> >> Message: 1
>> >> Date: Fri, 3 Mar 2023 17:48:03 +0300
>> >> From: mario wrk <wrkmario at gmail.com <mailto:wrkmario at gmail.com
>> ><mailto:wrkmario at gmail.com <mailto:wrkmario at gmail.com>>>
>> >> To: mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org
>> ><mailto:mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>>
>> >> Subject: [MITgcm-support] too many values for NAMELIST variable
>> >> Message-ID:
>> >>         <
>> CAAfDP0dnjOKcAO682mC1+z1BDGmAYXdOaC3-iLQfJa0E8kinjA at mail.gmail.com
>> <mailto:
>> CAAfDP0dnjOKcAO682mC1%2Bz1BDGmAYXdOaC3-iLQfJa0E8kinjA at mail.gmail.com
>> ><mailto:
>> CAAfDP0dnjOKcAO682mC1%2Bz1BDGmAYXdOaC3-iLQfJa0E8kinjA at mail.gmail.com
>> <mailto:
>> CAAfDP0dnjOKcAO682mC1%252Bz1BDGmAYXdOaC3-iLQfJa0E8kinjA at mail.gmail.com>>>
>> >> Content-Type: text/plain; charset="utf-8"
>> >>
>> >> Dear MITgcm community,
>> >> I was running a high resolution model in parallel  with OpenMPI and
>> got the
>> >> error below.
>> >> Does anyone have a clue?
>> >> Best,
>> >> Mario
>> >>
>> >>
>> >> 799: forrtl: severe (18): too many values for NAMELIST variable, unit
>> 11,
>> >> file .........run_ad/scratch1.000000799, line 3315, position 7
>> >>  799: Image              PC                Routine            Line
>> >>  Source
>> >>  799: libifcoremt.so.5   00001555553E6E79  for__io_return
>> Unknown
>> >>  Unknown
>> >>  799: libifcoremt.so.5   000015555542F3F5  for_read_seq_nml
>> Unknown
>> >>  Unknown
>> >>  799: mitgcmuv_ad        0000000000786AC8  Unknown
>>  Unknown
>> >>  Unknown
>> >>  799: mitgcmuv_ad        000000000077F9A4  Unknown
>>  Unknown
>> >>  Unknown
>> >>  799: mitgcmuv_ad        0000000000862732  Unknown
>>  Unknown
>> >>  Unknown
>> >>  799: mitgcmuv_ad        00000000008BD780  Unknown
>>  Unknown
>> >>  Unknown
>> >>  799: mitgcmuv_ad        00000000004037C2  Unknown
>>  Unknown
>> >>  Unknown
>> >>  799: libc-2.28.so <
>> https://urldefense.com/v3/__http://libc-2.28.so__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eh0fxt6g$
>> ><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4ppnZWw$>>
>>      0000155550887493  __libc_start_main     Unknown
>> >>  Unknown
>> >>  799: mitgcmuv_ad        00000000004036CE  Unknown
>>  Unknown
>> >>  Unknown
>> >> -------------- next part --------------
>> >> An HTML attachment was scrubbed...
>> >> URL: <
>> http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/14bbf386/attachment-0001.html
>> <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/14bbf386/attachment-0001.html__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HZ4FwflA$
>> ><
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/14bbf386/attachment-0001.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKbgSCSBw$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/14bbf386/attachment-0001.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKbgSCSBw$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0GCD7B1iw$
>> >>>
>> >>
>> >> ------------------------------
>> >>
>> >> Message: 2
>> >> Date: Fri, 3 Mar 2023 15:11:44 +0000
>> >> From: "Menemenlis, Dimitris (US 329B)"
>> >>         <dimitris.menemenlis at jpl.nasa.gov <mailto:
>> dimitris.menemenlis at jpl.nasa.gov><mailto:dimitris.menemenlis at jpl.nasa.gov
>> <mailto:dimitris.menemenlis at jpl.nasa.gov>>>
>> >> To: MITgcm Support <mitgcm-support at mitgcm.org <mailto:
>> mitgcm-support at mitgcm.org><mailto:mitgcm-support at mitgcm.org <mailto:
>> mitgcm-support at mitgcm.org>>>
>> >> Subject: Re: [MITgcm-support] too many values for NAMELIST variable
>> >> Message-ID: <541236B8-2F43-46B3-A2BE-67CC43AD6D94 at jpl.nasa.gov
>> <mailto:541236B8-2F43-46B3-A2BE-67CC43AD6D94 at jpl.nasa.gov><mailto:
>> 541236B8-2F43-46B3-A2BE-67CC43AD6D94 at jpl.nasa.gov <mailto:
>> 541236B8-2F43-46B3-A2BE-67CC43AD6D94 at jpl.nasa.gov>>>
>> >> Content-Type: text/plain; charset="us-ascii"
>> >>
>> >> There is a problem with one of your runtime parameter files (data or
>> data.*) in your runtime directory run_ad.
>> >>
>> >> On Mar 3, 2023, at 6:48 AM, mario wrk <wrkmario at gmail.com <mailto:
>> wrkmario at gmail.com><mailto:wrkmario at gmail.com <mailto:wrkmario at gmail.com>>>
>> wrote:
>> >>
>> >> Dear MITgcm community,
>> >> I was running a high resolution model in parallel  with OpenMPI and
>> got the error below.
>> >> Does anyone have a clue?
>> >> Best,
>> >> Mario
>> >>
>> >>
>> >> 799: forrtl: severe (18): too many values for NAMELIST variable, unit
>> 11, file .........run_ad/scratch1.000000799, line 3315, position 7
>> >>  799: Image              PC                Routine            Line
>>     Source
>> >>  799: libifcoremt.so.5   00001555553E6E79  for__io_return
>> Unknown  Unknown
>> >>  799: libifcoremt.so.5   000015555542F3F5  for_read_seq_nml
>> Unknown  Unknown
>> >>  799: mitgcmuv_ad        0000000000786AC8  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        000000000077F9A4  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        0000000000862732  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        00000000008BD780  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        00000000004037C2  Unknown
>>  Unknown  Unknown
>> >>  799: libc-2.28.so <
>> https://urldefense.com/v3/__http://libc-2.28.so__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eh0fxt6g$
>> ><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4ppnZWw$
>> >><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHWWSPPDd$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHWWSPPDd$__;Lw!!Mih3wA!Fw1l33SB9AEiV
>>  bOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0FHxsfpcw$>>
>>      0000155550887493  __libc_start_main     Unknown  Unknown
>> >>  799: mitgcmuv_ad        00000000004036CE  Unknown
>>  Unknown  Unknown
>> >> _______________________________________________
>> >> MITgcm-support mailing list
>> >> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org><mailto:
>> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org>>
>> >>
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHXBtL2F1$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHXBtL2F1$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HPqiAqnw$
>> >
>> >>
>> >> -------------- next part --------------
>> >> An HTML attachment was scrubbed...
>> >> URL: <
>> http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/3f126b2a/attachment-0001.html
>> <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/3f126b2a/attachment-0001.html__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eua0NqfQ$
>> ><
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/3f126b2a/attachment-0001.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKaUh3sgz$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/3f126b2a/attachment-0001.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKaUh3sgz$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0FxFGJI-Q$
>> >>>
>> >>
>> >> ------------------------------
>> >>
>> >> Message: 3
>> >> Date: Fri, 3 Mar 2023 15:35:12 +0000
>> >> From: "Carroll, Dustin (US 329C-Affiliate)"
>> >>         <dustin.carroll at jpl.nasa.gov <mailto:
>> dustin.carroll at jpl.nasa.gov><mailto:dustin.carroll at jpl.nasa.gov <mailto:
>> dustin.carroll at jpl.nasa.gov>>>
>> >> To: "mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org
>> ><mailto:mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>>" <
>> mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org><mailto:
>> mitgcm-support at mitgcm.org <mailto:mitgcm-support at mitgcm.org>>>
>> >> Subject: Re: [MITgcm-support] too many values for NAMELIST variable
>> >> Message-ID:
>> >>         <
>> SJ0PR09MB90307EB60388A8CD177F8130BDB39 at SJ0PR09MB9030.namprd09.prod.outlook.com
>> <mailto:
>> SJ0PR09MB90307EB60388A8CD177F8130BDB39 at SJ0PR09MB9030.namprd09.prod.outlook.com
>> ><mailto:
>> SJ0PR09MB90307EB60388A8CD177F8130BDB39 at SJ0PR09MB9030.namprd09.prod.outlook.com
>> <mailto:
>> SJ0PR09MB90307EB60388A8CD177F8130BDB39 at SJ0PR09MB9030.namprd09.prod.outlook.com
>> >>>
>> >>
>> >> Content-Type: text/plain; charset="windows-1252"
>> >>
>> >> To follow up on Dimitris? comment, if you open the file
>> ?scratch1.000000799? in your run_ad directory
>> >> and look at line 3315, position 7 this will tell you where the syntax
>> error / incorrect parameter value
>> >> occurred in your data.* file.
>> >>
>> >> From: MITgcm-support <mitgcm-support-bounces at mitgcm.org <mailto:
>> mitgcm-support-bounces at mitgcm.org><mailto:
>> mitgcm-support-bounces at mitgcm.org <mailto:
>> mitgcm-support-bounces at mitgcm.org>>> on behalf of Menemenlis, Dimitris
>> (US 329B) <dimitris.menemenlis at jpl.nasa.gov <mailto:
>> dimitris.menemenlis at jpl.nasa.gov><mailto:dimitris.menemenlis at jpl.nasa.gov
>> <mailto:dimitris.menemenlis at jpl.nasa.gov>>>
>> >> Date: Friday, March 3, 2023 at 7:12 AM
>> >> To: MITgcm Support <mitgcm-support at mitgcm.org <mailto:
>> mitgcm-support at mitgcm.org><mailto:mitgcm-support at mitgcm.org <mailto:
>> mitgcm-support at mitgcm.org>>>
>> >> Subject: [EXTERNAL] Re: [MITgcm-support] too many values for NAMELIST
>> variable
>> >> There is a problem with one of your runtime parameter files (data or
>> data.*) in your runtime directory run_ad.
>> >>
>> >>
>> >> On Mar 3, 2023, at 6:48 AM, mario wrk <wrkmario at gmail.com <mailto:
>> wrkmario at gmail.com><mailto:wrkmario at gmail.com <mailto:wrkmario at gmail.com>>>
>> wrote:
>> >>
>> >> Dear MITgcm community,
>> >> I was running a high resolution model in parallel  with OpenMPI and
>> got the error below.
>> >> Does anyone have a clue?
>> >> Best,
>> >> Mario
>> >>
>> >>
>> >> 799: forrtl: severe (18): too many values for NAMELIST variable, unit
>> 11, file .........run_ad/scratch1.000000799, line 3315, position 7
>> >>  799: Image              PC                Routine            Line
>>     Source
>> >>  799: libifcoremt.so.5   00001555553E6E79  for__io_return
>> Unknown  Unknown
>> >>  799: libifcoremt.so.5   000015555542F3F5  for_read_seq_nml
>> Unknown  Unknown
>> >>  799: mitgcmuv_ad        0000000000786AC8  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        000000000077F9A4  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        0000000000862732  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        00000000008BD780  Unknown
>>  Unknown  Unknown
>> >>  799: mitgcmuv_ad        00000000004037C2  Unknown
>>  Unknown  Unknown
>> >>  799: libc-2.28.so <
>> https://urldefense.com/v3/__http://libc-2.28.so__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0Eh0fxt6g$
>> ><
>> https://urldefense.us/v3/__http://libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*libc-2.28.so__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKTl0Fk4g$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4ppnZWw$
>> >><
>> https://urldefense.us/v3/__http:/libc-2.28.so__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHWWSPPDd$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/libc-2.28.so__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHWWSPPDd$__;!!Mih3wA!Fw1l33SB9AEiVbOdD
>>  GUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H0KA7sDg$>>
>>    0000155550887493  __libc_start_main     Unknown  Unknown
>> >>  799: mitgcmuv_ad        00000000004036CE  Unknown
>>  Unknown  Unknown
>> >> _______________________________________________
>> >> MITgcm-support mailing list
>> >> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org><mailto:
>> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org>>
>> >>
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHXBtL2F1$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!M2W-DPfuY1q_PomytTcSW2ZHGL19dSVErDKaeBk6O3OIi_YZzV1x60iLZjKuaNrKDqjCzquEc3Kh4E8hzb2sHXBtL2F1$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HPqiAqnw$
>> >
>> >>
>> >> -------------- next part --------------
>> >> An HTML attachment was scrubbed...
>> >> URL: <
>> http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/c74ea89b/attachment.html
>> <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/c74ea89b/attachment.html__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H4JUmqhg$
>> ><
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/c74ea89b/attachment.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKRYdfUND$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230303/c74ea89b/attachment.html__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKRYdfUND$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0ES-1CgPA$
>> >>>
>> >>
>> >> ------------------------------
>> >>
>> >> Subject: Digest Footer
>> >>
>> >> _______________________________________________
>> >> MITgcm-support mailing list
>> >> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org><mailto:
>> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org>>
>> >> http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HeVji0WA$
>> ><
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKcuWvN_K$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKcuWvN_K$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H-S3PAwg$
>> >>
>> >>
>> >>
>> >> ------------------------------
>> >>
>> >> End of MITgcm-support Digest, Vol 237, Issue 1
>> >> **********************************************
>> >> _______________________________________________
>> >> MITgcm-support mailing list
>> >> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org>
>> >>
>> https://urldefense.us/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKcuWvN_K$
>> <
>> https://urldefense.com/v3/__https://urldefense.us/v3/__http:/*mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!PvBDto6Hs4WbVuu7!PW3tsJze90OC9AZksTklqll_4rOFJ960_dMKKzN_IrfuD8n7DhhAJcHxS3Bjhzsf3W94H-e37L-aZ7MEptTBKcuWvN_K$__;Lw!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0H-S3PAwg$
>> >
>> >> -------------- next part --------------
>> >> An HTML attachment was scrubbed...
>> >> URL: <
>> http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230304/7e96aed9/attachment.html
>> <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230304/7e96aed9/attachment.html__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HUI_5yaA$
>> >>
>> >>
>> >> ------------------------------
>> >>
>> >> Subject: Digest Footer
>> >>
>> >> _______________________________________________
>> >> MITgcm-support mailing list
>> >> MITgcm-support at mitgcm.org <mailto:MITgcm-support at mitgcm.org>
>> >> http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support <
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HeVji0WA$
>> >
>> >>
>> >>
>> >> ------------------------------
>> >>
>> >> End of MITgcm-support Digest, Vol 237, Issue 4
>> >> **********************************************
>> > _______________________________________________
>> > MITgcm-support mailing list
>> > MITgcm-support at mitgcm.org
>> >
>> https://urldefense.com/v3/__http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support__;!!Mih3wA!Fw1l33SB9AEiVbOdDGUXBgKDrAnbOJSQ7GLA3L2zbR6FiySkJYje5j0asNrSUMCH_iPQwAdzY0HeVji0WA$
>>
>> -------------- next part --------------
>> An HTML attachment was scrubbed...
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>> http://mailman.mitgcm.org/pipermail/mitgcm-support/attachments/20230304/cc4b7024/attachment.html
>> >
>>
>> ------------------------------
>>
>> Subject: Digest Footer
>>
>> _______________________________________________
>> MITgcm-support mailing list
>> MITgcm-support at mitgcm.org
>> http://mailman.mitgcm.org/mailman/listinfo/mitgcm-support
>>
>>
>> ------------------------------
>>
>> End of MITgcm-support Digest, Vol 237, Issue 6
>> **********************************************
>>
>
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