[MITgcm-support] [EXTERNAL] Re: Errors with eedata and eeset_parms

[Jonathan Lauderdale]

Hi Katie,

This particular error is asking you to change the

> #undef DIAGSTATS_REGION_MASK


line in your DIAG_OPTIONS.h file to 

> #define DIAGSTATS_REGION_MASK

which “includes” the relevant code when you recompile to deal with pre-level/regional diagnostics. 

Wondering if your symlink command needs an extra “/“, as in

> ln -s ../input/* .


Hope that helps!

Jonathan
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> On Jul 31, 2020, at 2:44 PM, Katie Hughes <kestagl at ucdavis.edu> wrote:
> 
> That worked! I had to modify my genmake2 and change -np 12. But for some reason, my symbolic link (ln -s ../input* .) to my input folder is not working so I had to add all my input files to my "run" folder. 
> 
> However my new error is: (PID.TID 0000.0001) *** ERROR *** DIAGSTATS_SET_REGIONS: #define DIAGSTATS_REGION_MASK missing in DIAG_OPTIONS.h
> 
> See attached my "DIAG_OPTIONS.h" file.
> 
> Thanks all!
> Katie Stagl Hughes
> 
> Ph.D. Candidate | Dept. of Civil & Environmental Engineering
> University of California, Davis
> kestagl at ucdavis.edu <mailto:kestagl at ucdavis.edu>
> 
> On Fri, Jul 31, 2020 at 11:05 AM Menemenlis, Dimitris (US 329C) <dimitris.menemenlis at jpl.nasa.gov <mailto:dimitris.menemenlis at jpl.nasa.gov>> wrote:
> … and also maybe try fixing:
> 
> (PID.TID 0000.0001) *** ERROR *** INI_PROCS:  but presently usingMPI = False (in "eedata")
> 
> 
>> On Jul 31, 2020, at 11:00 AM, kaveh Purkiani <kavehpurkiani at googlemail.com <mailto:kavehpurkiani at googlemail.com>> wrote:
>> 
>> Hi Katie,
>> 
>> did you try -np 12 instead of 4.
>> Best
>> Kaveh
>> 
>> On Fri 31. Jul 2020 at 19:56, Katie Hughes <kestagl at ucdavis.edu <mailto:kestagl at ucdavis.edu>> wrote:
>> Hello,
>> 
>> I'm new to MITgcm, so apologies if I leave out any pertinent information.
>> 
>> I'm trying to run a 2D under-ice simulation with 12 tasks per node (12 horizontal partitions of the grid for parallelization). I'm receiving errors for 'eedata'. 
>> 
>> I'm running the model with the command mpirun -np 4 ./mitgcmuv but was previously just using ./mitgcmuv and getting the same errors.
>> 
>> Here is an example of my eedata and the coinciding errors:
>> If I use this eedata:
>> &EEPARMS
>> 
>> /
>> 
>> I get this error:
>> 
>> (PID.TID 0000.0001) *** ERROR *** INI_PROCS: needs MPI for multi-procs (nPx*nPy=    12) setup
>> 
>> (PID.TID 0000.0001) *** ERROR *** INI_PROCS:  but presently usingMPI = False (in "eedata")
>> 
>> (PID.TID 0000.0001) *** ERROR *** EEDIE: earlier error in multi-proc/thread setting
>> 
>> 
>> (PID.TID 0000.0001) *** ERROR *** PROGRAM MAIN: ends with fatal Error
>> 
>> 
>> 
>> If I use this eedata:
>> 
>> &EEPARMS
>>  usingMPI=TRUE,
>> /
>> I get this error:
>> (PID.TID 0000.0001) *** ERROR *** INI_PROCS: needs MPI for multi-procs (nPx*nPy=    12) setup
>> 
>> (PID.TID 0000.0001) *** ERROR *** INI_PROCS:  but presently usingMPI = False (in "eedata")
>> 
>> (PID.TID 0000.0001) *** ERROR *** EEDIE: earlier error in multi-proc/thread setting
>> 
>> (PID.TID 0000.0001) *** ERROR *** PROGRAM MAIN: ends with fatal Error
>> 
>> 
>> Any suggestions?
>> 
>> Thank you in advance!
>> Katie Stagl Hughes
>> 
>> Ph.D. Candidate | Dept. of Civil & Environmental Engineering
>> University of California, Davis
>> kestagl at ucdavis.edu <mailto:kestagl at ucdavis.edu>_______________________________________________
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> 
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