[MITgcm-support] Problem with CS96 model set-up
Stephen Hunter [EAR]
S.Hunter at leeds.ac.uk
Fri Feb 28 09:22:00 EST 2020
Thank you Jean-Michel,
Those grid files worked well. One more question if you don’t mind -
If I wanted to create these grid files myself for an arbitrary CS grid (eg. cs64), is there a way to do this via Matlab/Python? (I assume the otters grid sets within ecco_for_las/version_4/grids/grids_input/cs_nostretch/ don’t have the rotation angle fields either)
Kind regards,
Stephen
> On 27 Feb 2020, at 16:39, Jean-Michel Campin <jmc at mit.edu> wrote:
>
> Hi Stephen,
>
> I would recommand to try to use the grid files from there, under CVS:
> http://wwwcvs.mitgcm.org/viewvc/MITgcm/MITgcm_contrib/dyncore_ASP/csgrids/ref_96
> with longitude in [-180,+180] or, if you prefer to have longitude in [0,+360], then
> you can take grid files directly from there, under CVS:
> http://wwwcvs.mitgcm.org/viewvc/MITgcm/MITgcm_contrib/dyncore_ASP/csgrids
>
> These sets of grid have been used, and they do contain the rotation-angle fields which
> might be missing in the grid files you tried to use.
>
> Cheers,
> Jean-Michel
>
> On Thu, Feb 27, 2020 at 03:28:27PM +0000, Stephen Hunter [EAR] wrote:
>> Dear MITgcm Support Team,
>>
>>
>>
>> I am trying to create a cube-sphere (CS96) MITgcm Ocean model setup which I plan to force with climatology derived from an Atmosphere-only GCM in a way similar to ECCO (but without the adjoint package and CS96 rather than LLC90 grid). I believe (well, hope) that I can create correctly the appropriate bathymetry and forcing binary files.
>>
>>
>>
>> My problem lies in the initialisation of the model, in particular regarding the grid setup. I have searched the manual and verification experiments for code but I am still unsure how to create the grid_cs96_face00[1-6].bin files. Fortunately, I found a set within http://mit.ecco-group.org/datasets/ecco_for_las/version_4/grids/grids_input/cs_nostretch/cube_96/, which appear to be the correct size (8bytes*(96+1)*(96+1)*16records = 1204352 bytes). I have renamed the files to grid_cs96.face001.bin etc. and set up my input/data to see read them. Additionally, I can read these grid_cs96.face00[1-6].bin binaries using Matlab GCMfaces and can create a mygrid structure (which I have used to create the bathymetry.bin). I believe these binary grid files are what I need. I have within input/data
>>
>>
>>
>> # Gridding parameters
>>
>> &PARM04
>>
>> horizGridFile='grid_cs96',
>>
>> usingCurvilinearGrid=.TRUE.,
>>
>>
>>
>> On running, the model fails with the following error
>>
>> forrtl: severe (36): attempt to access non-existent record, unit 9 file [my_full_path]/build/grid_cs96.face001.bin
>>
>>
>>
>> I have searched MITgcm-support and it seems the model is trying to access records that are not within the grid_cs96.face00[1-6].bin files - which suggests an incorrect SIZE.h file. I have tried numerous configurations of SIZE.h. A simple case I have for SIZE.h which (I believe) sets up a CS topology with 24 tiles running on 6 processors.
>>
>>
>>
>> PARAMETER (
>>
>> & sNx = 48,
>>
>> & sNy = 48,
>>
>> & OLx = 4,
>>
>> & OLy = 4,
>>
>> & nSx = 4,
>>
>> & nSy = 1,
>>
>> & nPx = 6,
>>
>> & nPy = 1,
>>
>> & Nx = sNx*nSx*nPx,
>>
>> & Ny = sNy*nSy*nPy,
>>
>> & Nr = 50 )
>>
>>
>>
>> Looking at the cs32 verification experiments which I can run, the experiment uses grid_cs32 .face00[1-6].bin files that are 156816bytes in size (e.g. within global_oce_cs32/input_fields/) whereas I would expect them to be 8bytes*(32+1)*(32+1)*16records=139392 bytes. Hence I think that I am misunderstanding something. I believe that my compiler optfile is correct (the verification experiments work).
>>
>>
>> Kind regards,
>> Stephen Hunter
>>
>> School of Earth & Environment
>> University of Leeds
>>
>
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