[MITgcm-support] Error on Cheyenne HPC with diagnostics package

[Martin Losch]

Hi Takaya,

the job-log implies says that the executable is looking for a file and cannot find it. And the traceback even gives a good clue, which file it is:
eeset_parms.F reads the file “eedata”. Are you sure that it is in your run directory?

Martin

> On 15. Nov 2018, at 23:48, Uchida Takaya <tu2140 at columbia.edu> wrote:
> 
> Dear MITgcm support,
> 
> I have a run on Cheyenne, which runs fine without the diagnostics package turned on but fails within seconds once I turn the package on and it gives me no useful errors except for:
> 
> MPT ERROR: MPI_COMM_WORLD rank 1589 has terminated without calling MPI_Finalize()
> 	aborting job
> 
> I use the same namelist files, which run fine on the Columbia University Habanero cluster so my expectation was that it should all work fine. I am a bit lost here and would like to know if others have had related issues running MITgcm on Cheyenne.
> 
> The optfile I use, which can also be found here ( https://github.com/roxyboy/ChannelMOC_Cheyenne/tree/master/SO_only-physics/channel_flat ) including the namelist files, is:
> 
> module load intel/17.0.1 mpt/2.15f netcdf/4.6.1
> 
> FC=mpif90
> CC=mpicc
> F90C=mpif90
> 
> DEFINES='-DALLOW_USE_MPI -DALWAYS_USE_MPI -DWORDLENGTH=4'
> CPP='/lib/cpp  -traditional -P'
> EXTENDED_SRC_FLAG='-132'
> OMPFLAG='-openmp'
> CFLAGS='-fPIC'
> LDADD='-shared-intel'
> 
> LIBS="-L${MPI_ROOT}/lib"
> INCLUDES="-I${MPI_ROOT}/include"
> NOOPTFLAGS='-O0 -fPIC'
> 
> #FFLAGS="-fPIC -convert big_endian -assume byterecl -align -xCORE-AVX2" # 4% slower with -O2
> FFLAGS="-fPIC -convert big_endian -assume byterecl -align"
> FDEBUG='-W0 -WB'
> FFLAGS="$FDEBUG $FFLAGS"
> 
> FOPTIM='-O3'
> FOPTIM="$FOPTIM -ip -fp-model precise -traceback -ftz"
> 
> Any advice would be appreciated.
> 
> Thank you,
> Takaya
> ———————
> PhD Candidate
> Physical Oceanography
> Columbia University in the City of New York
> https://roxyboy.github.io/
> 
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