[MITgcm-support] Diagnostics have not been filled

[Pascal Bourgault]

I have tried to compute it myself, and it works!  Since thie error message
is showing up in the STDERR files, I thought there might be a problem
somewhere else...

And I think you're right, my vertical diffusivity should be constant
everywhere. Do I understand that if a diagnostics is all zeros, the "
WARNING -   has not been filled (ndiag=  0 )" is written in STDERRs?

--
Pascal

Le mar. 10 juil. 2018 à 11:42, Bertrand Louis Rene Delorme <
bdelorme at stanford.edu> a écrit :

> Salut Pascal,
>
>
>
> I am not sure about the “momVort3” diagnostic: have you tried to compute
> this term yourself with UVEL and VVEL to see what solution you get? For the
> “DFrI_TH” diagnostic, maybe your vertical diffusivity is just constant
> everywhere?
>
>
>
> Cheers,
>
> Bertrand
>
>
>
>
>
> *De : *MITgcm-support <mitgcm-support-bounces at mitgcm.org> au nom de
> Pascal Bourgault <pascal.bourgault at gmail.com>
> *Répondre à : *"mitgcm-support at mitgcm.org" <mitgcm-support at mitgcm.org>
> *Date : *mardi 10 juillet 2018 à 8:07 AM
> *À : *"mitgcm-support at mitgcm.org" <mitgcm-support at mitgcm.org>
> *Objet : *[MITgcm-support] Diagnostics have not been filled
>
>
>
> Hi,
>
> In my data.diagnostics, I ask the model to output the "momVort3" and the
> "DFrI_TH" diagnostic, and many others. I am using mpi and the following
> packages are compiled in my mitgcmuv : gfp, flt, mnc, mdsio. Also, momVort3
> and DFrI_TH both appear in the available_diagnostics.log file.
>
>
>
> However, the output values for those are all zeros in the final files. For
> example, in my dynDiag*.nc files, where I save UVEL, VVEL, WVEL and
> momVort3, the three velocities look good, but momVort3 is only zeros.
>
> In the STDERR.* of the model I have this
> """
> (PID.TID 0000.0001) - WARNING - from DIAGNOSTICS_OUT at iter=     17286
> (PID.TID 0000.0001) - WARNING -   diag.#   117 : DFrI_TH  (#   7 ) in
> outp.Stream: tempDiag
> (PID.TID 0000.0001) - WARNING -   has not been filled (ndiag=  0 )
> (PID.TID 0000.0001) WARNING DIAGNOSTICS_OUT  => write ZEROS instead
> (PID.TID 0000.0001) - WARNING - from DIAGNOSTICS_OUT at iter=     17286
> (PID.TID 0000.0001) - WARNING -   diag.#   174 : momVort3 (#   4 ) in
> outp.Stream: dynDiag
> (PID.TID 0000.0001) - WARNING -   has not been filled (ndiag=  0 )
>  """
>
> repeating numberous times.
>
> Are there some options in some *_OPTIONS.h files I need to turn on to save
> those fields? I don't really understand the error...
>
> I can provide any other config info needed, I just don't know what is
> useful in this case...
>
> Thanks!
>
> --
>
> Pascal
>
>
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