[MITgcm-support] reducing the size of STDOUT files etc

Dustin Carroll dcarroll at uoregon.edu
Mon May 12 10:10:48 EDT 2014


Hi Jonny,

You can also set debugLevel = -1 in your data file to reduce output. I use this to save on file space once my model is tested and stable.

Cheers,
Dustin

> On May 12, 2014, at 6:20 AM, Jonny Williams <Jonny.Williams at bristol.ac.uk> wrote:
> 
> Hi Martin
> 
> Thanks for that. I hadn't realised that I'd defined monitorFreq twice! 
> 
> Thanks again!
> 
> Jonny
> 
> 
>> On 12 May 2014 13:38, Martin Losch <Martin.Losch at awi.de> wrote:
>> Hi Jonny,
>> 
>> each process will create it’s own pair of STDOUT/STDERR, not much you can do about it without hacking the code.
>> 
>> But I saw that your monitorFreq = 1.
>> this means that’s you’ll get output every timestep (and in all STDOUT.*). This appears to be an overkill for a “production” run (where you don’t test things any longer), will make the model very slow and the STDOUT-files very large. For a production run I usually use a monitorFreq = 20-50*deltaT.
>> 
>> M.
>> 
>> On May 12, 2014, at 1:58 PM, Jonny Williams <Jonny.Williams at bristol.ac.uk> wrote:
>> 
>> > Hi there
>> >
>> > I am trying to reduce the size of the output from my model because I am running on a very large number of processors and all the STDOUT* files (for example) are taking up too much space.
>> >
>> > I've followed the instructions on this MITgcm support page...
>> >
>> > http://mitgcm.org/pipermail/mitgcm-support/2009-April/006013.html
>> >
>> > ... but I am still getting a STDOUT file for every processor (>1000) which is killing my disk space allowance! Is there something that I've missed? I thought that running with useSingleCpuIO=.TRUE. should mean that I only get 1 STDOUT file? I've attached my data file in case anyone has any ideas as to what is going wrong?!
>> >
>> > Many thanks for your help.
>> >
>> > Jonny
>> >
>> > --
>> > Dr Jonny Williams
>> > School of Geographical Sciences
>> > University of Bristol
>> > University Road
>> > BS8 1SS
>> >
>> > +44 (0)117 3318352
>> > jonny.williams at bristol.ac.uk
>> > bit.ly/jonnywilliams
>> > <data>_______________________________________________
>> > MITgcm-support mailing list
>> > MITgcm-support at mitgcm.org
>> > http://mitgcm.org/mailman/listinfo/mitgcm-support
>> 
>> 
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> 
> 
> 
> -- 
> Dr Jonny Williams
> School of Geographical Sciences
> University of Bristol
> University Road
> BS8 1SS
> 
> +44 (0)117 3318352
> jonny.williams at bristol.ac.uk
> bit.ly/jonnywilliams
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> MITgcm-support mailing list
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> http://mitgcm.org/mailman/listinfo/mitgcm-support
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