[MITgcm-support] Any tutorials on the MITgcm adjoint model

[Xiangming Zeng]

Hi Patrick,

You are right. I tried a new version of gcc and gfortran, and it works. The
report is as follow:

*parsing options...  OK (COMMAND='./mitgcmuv_ad > output_oadm.txt')*
*creating the comparison code (using CC=cc)...  OK*
*skipping mpack build*

*default    10*
*G D M    C  A  F*
*e p a R  o  d  D*
*n n k u  s  G  G*
*2 d e n  t  r  r*

*-------------------------------------------------------------------------------*

*Experiment:  OpenAD*

*genmake ... successful*
*clean build-dir: make Clean ... successful*
*make depend skipped!*
*make ... successful*
*clean run-dir ... successful*
*linkdata from dirs: input_oad*
*ldir=input_oad: data data.autodiff data.cost data.ctrl data.gmredi
data.grdchk *
*data.mnc data.optim data.pkg eedata ncheckLev.conf prepare_run ; link
files: bat*
*hymetry.bin lev_s.bin lev_sss.bin lev_sst.bin lev_t.bin ncep_emp.bin
ncep_qnet.b*
*in trenberth_taux.bin trenberth_tauy.bin from dir:
../../tutorial_global_oce_lat*
*lon/input*
*runmodel in OpenAD/run ... successful*
*=> output from running in OpenAD/run :*
*>  link mitgcmuv_ad from dir ../build*
*> STOP NORMAL END*
*There were 16 decimal places of similarity for "ADM CostFct"*
*There were 16 decimal places of similarity for "ADM Ad Grad"*
*There were 16 decimal places of similarity for "ADM FD Grad"*

*-------------------------------------------------------------------------------*
*No results email was sent.*
*Wed Jul 30 10:20:48 EDT 2014*
*run: ./testreport -oad -of
/he_data/he/xzeng2/MITgcm/tools/build_options/linux_a*
*md64_gfortran -t OpenAD*
*on : Linux login04 2.6.18-164.el5 #1 SMP Thu Sep 3 03:28:30 EDT 2009
x86_64 x86_*
*64 x86_64 GNU/Linux*

*
OPTFILE=/he_data/he/xzeng2/MITgcm/tools/build_options/linux_amd64_gfortran*

*Adjoint generated by OpenAD*
*default    10*
*G D M    C  A  F*
*e p a R  o  d  D*
*n n k u  s  G  G*
*2 d e n  t  r  r*

*Y Y Y Y 16>16<16 pass  OpenAD*
*Start time:  Wed Jul 30 10:20:48 EDT 2014*
*End time:    Wed Jul 30 12:52:40 EDT 2014*
*======== End of testreport execution ========*



However, when I tried to use the pgi with mpi to compile, it fails again.
It seems it's still the adjoint model problem, because I can compile the
model without adjoint successfully. The error message is as follow. Any
idea? Thanks a lot.



*parsing options...  OK (COMMAND='./mitgcmuv_ad > output_oadm.txt')*
*creating the comparison code (using CC=cc)...  OK*
*skipping mpack build*

*default    10*
*G D M    C  A  F*
*e p a R  o  d  D*
*n n k u  s  G  G*
*2 d e n  t  r  r*

*-------------------------------------------------------------------------------*

*Experiment:  OpenAD*

*genmake ... successful*
*clean build-dir: make Clean ... successful*
*make depend skipped!*
*make ... make: [revolve.o] Error 127 (ignored)*
*ln -s ../../../tools/OAD_support/iaddr.c .*
*mpicc  -DWORDLENGTH=4 -DDEFAULT_R8 -DALLOW_USE_MPI -DHAVE_SYSTEM
-DHAVE_FDATE -D*
*HAVE_ETIME -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT
-DHAVE_NETCDF -*
*DHAVE_FLUSH  -I/usr/local/apps/mpich/x86_64/pgi105/mx127..7/include
-I/he_data/h*
*e/jbzambon/netcdf/netcdf-3.6.3/pgi105/mx/build/include
-I/usr/local/apps/acml/ac*
*ml4.3.0/pgi64/include -c iaddr.c*
*ln -s ../../../tools/OAD_support/timeRatio.c .*
*mpicc  -DWORDLENGTH=4 -DDEFAULT_R8 -DALLOW_USE_MPI -DHAVE_SYSTEM
-DHAVE_FDATE -D*
*HAVE_ETIME -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT
-DHAVE_NETCDF -*
*DHAVE_FLUSH  -I/usr/local/apps/mpich/x86_64/pgi105/mx127..7/include
-I/he_data/h*
*e/jbzambon/netcdf/netcdf-3.6.3/pgi105/mx/build/include
-I/usr/local/apps/acml/ac*
*ml4.3.0/pgi64/include -c timeRatio.c*
*mpif90 -byteswapio -Mnodclchk  -tp amd64 -O0 -Munroll -Kieee -c
OAD_intrinsics_o*
*ad.f*
*pgf90-Info-Switch -Munroll forces -O2*
*PGF90-F-0004-Unable to open MODULE file oad_active.mod
(OAD_intrinsics_oad.f: 4)*
*PGF90/x86-64 Linux 10.5-0: compilation aborted*
*make: *** [OAD_intrinsics_oad.o] Error 2*
*failed*

*-------------------------------------------------------------------------------*
*No results email was sent.*
*Wed Jul 30 13:24:36 EDT 2014*
*run: ./testreport -oad -of
/he_data/he/xzeng2/MITgcm/tools/build_options/he_pgf9*
*0_mpi -t OpenAD*
*on : Linux login04 2.6.18-164.el5 #1 SMP Thu Sep 3 03:28:30 EDT 2009
x86_64 x86_*
*64 x86_64 GNU/Linux*

*  OPTFILE=/he_data/he/xzeng2/MITgcm/tools/build_options/he_pgf90_mpi*

*Adjoint generated by OpenAD*

*default    10*
*G D M    C  A  F*
*e p a R  o  d  D*
*n n k u  s  G  G*
*2 d e n  t  r  r*

*Y Y N N .. .. .. N/O   OpenAD*

-- 
Xiangming Zeng
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