[MITgcm-support] problem running MITgcm/verification//tutorial_global_oce_latlon/

Jonny Williams Jonny.Williams at bristol.ac.uk
Wed Oct 9 12:24:56 EDT 2013


I would guess that the key error in this is...

make[1]: mpif77: Command not found
make[1]: *** [bulkf_ave.o] Error 127
make[1]: Leaving directory
`/nfs01/n02/n02/ggjhtw/MITgcm/verification/global_ocean.cs32x15/build'
make: *** [fwd_exe_target] Error 2
failed

?





On 9 October 2013 15:38, Menemenlis, Dimitris (3248) <
Dimitris.Menemenlis at jpl.nasa.gov> wrote:

>  Looks like you are missing other parameter files too.
>
>  In verification try: ./testreport -mpi -t global_ovean.cs32x15
>
> Dimitris Menemenlis
> 818-625-6498
>
> On Oct 9, 2013, at 7:32 AM, "Jonny Williams" <Jonny.Williams at bristol.ac.uk>
> wrote:
>
>   I have now found a file which I think is along the lines of what I need
> (eedata). Its contents is as follows...
>
>  START
>
>  # Example "eedata" file
> # Lines beginning "#" are comments
> # nTx - No. threads per process in X
> # nTy - No. threads per process in Y
>  &EEPARMS
>  nTx=1,nTy=1
>  /
> # Note: Some systems use & as the
> # namelist terminator. Other systems
> # use a / character (as shown here).
>
>  END
>
>  I am now getting a different error, which is as follows...
>
>  START
>
>  Warning: ieee_inexact is signaling
> Warning: ieee_inexact is signaling
> ABNORMAL END: S/R OPEN_COPY_DATA_FILE
> ABNORMAL END: S/R OPEN_COPY_DATA_FILE
> [NID 02345] 2013-10-09 14:27:15 Apid 5947911: initiated application
> termination
>
>  END
>
>  Thanks again
>
>  Jonny
>
>
> On 9 October 2013 15:01, Menemenlis, Dimitris (3248) <
> Dimitris.Menemenlis at jpl.nasa.gov> wrote:
>
>>  Do you have a file called "eedata" in your run directory?
>>
>> Dimitris Menemenlis
>> 818-625-6498
>>
>> On Oct 9, 2013, at 6:57 AM, "Jonny Williams" <
>> Jonny.Williams at bristol.ac.uk> wrote:
>>
>>   Hi there
>>
>>  I am trying to run the MITgcm/verification//tutorial_global_oce_latlon/
>> example which was pre-loaded when I downloaded the MITgcm code using CVS a
>> couple of days ago.
>>
>>  I plan to run parallelised codes in the future and so I am using the
>> SIZE.h file which was originally called SIZE.h_mpi in the default
>> installation.
>>
>>  The code compiled successfully as far as I can tell.
>>
>>  When I attempt to run the script I get the following error message in a
>> file called testing1.e1726317 (my job is called testing1)...
>>
>>  START
>>
>>  gPGFIO-F-209/formatted read/unit=13/'OLD' specified for file which does
>> not exist.
>>  In source file eeset_parms.f, at line number 1778
>> [NID 02545] 2013-10-09 13:28:18 Apid 5947459: initiated application
>> termination
>>
>>  END
>>
>>  The offending line (line 1778 of eeset_parms.f) reads as follows...
>>
>>  START
>>
>>  READ(eeDataUnit,FMT='(A)',END=1001) RECORD
>>
>>  END
>>
>>  Is anyone able to shed any light on this?
>>
>>  For your information I am running on the HECToR supercomputer cluster
>> in the UK using scripts which were given to me by a collaborator who is
>> already successfully using the MITgcm model on the same machine.
>>
>>  Many thanks!
>>
>>  Jonny Williams
>>
>>
>>  --
>>  Dr Jonny Williams
>> School of Geographical Sciences
>> University of Bristol
>> University Road
>> BS8 1SS
>>
>>  +44 (0)117 3318352
>> jonny.williams at bristol.ac.uk<https://mail.google.com/mail/?view=cm&fs=1&tf=1&to=jonny.williams@bristol.ac.uk>
>> bit.ly/jonnywilliams
>>
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>>
>>
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>>
>
>
>  --
>  Dr Jonny Williams
> School of Geographical Sciences
> University of Bristol
> University Road
> BS8 1SS
>
>  +44 (0)117 3318352
> jonny.williams at bristol.ac.uk
> bit.ly/jonnywilliams
>
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> MITgcm-support mailing list
> MITgcm-support at mitgcm.org
> http://mitgcm.org/mailman/listinfo/mitgcm-support
>
>
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>


-- 
Dr Jonny Williams
School of Geographical Sciences
University of Bristol
University Road
BS8 1SS

+44 (0)117 3318352
jonny.williams at bristol.ac.uk
bit.ly/jonnywilliams
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