[MITgcm-support] error with mpirun
李志远
oceanlizy at 163.com
Mon Dec 23 06:41:23 EST 2013
dear all;
I met a problem when I run my model with mpi , I compile with mpi normally ,and it generated the executable file "mitgcmuv" ,but when I run it ,errors occured:
mpirun was unable to launch the specified application as it could not access or execute an executable:
Executable : ./mitgcmuv
my qsub.sh is as followed:
#!/bin/bash -x
#PBS -N allenson3_barotropic
#PBS -l nodes=1:ppn=9
#PBS -l walltime=720:00:00
#PBS -j oe
#PBS -q bigmem
#
#define variables
#
NSLOTS=`cat ${PBS_NODEFILE} | wc -l`
echo "This jobs is "$PBS_JOBID@$PBS_QUEUE
#
#running jobs
#
PBS_O_WORKDIR=${DIRECTORY}
DIRECTORY=/dcfs2/users/allenson3/MITgcm/verification/work/input
cd $PBS_O_WORKDIR
time -p /dcfs2/program/mpi/openmpi/1.4.3/pgcc_pgf90/bin/mpirun -np ${NSLOTS} -hostfile ${PBS_NODEFILE} ./mitgcmuv
exit 0
I am looking forward to your quick reply !
best regards
lizhiyuan
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