[MITgcm-support] Strips on the surface

Nataliya Stashchuk nataliya.stashchuk at plymouth.ac.uk
Fri May 18 23:53:41 EDT 2012


Hi Kateryna,

Try to comment tempAdvScheme=77.

Nataliya

Sent from my iPad

On May 18, 2012, at 20:01, "Kateryna Terletska" <kterletska at gmail.com> wrote:

> 
> Dear MITgcm users,
> 
> I run MIT model to investigate 3D internal seiches in elongated lakes. I run parallel version of MIT on 32 nodes. 
> But I obtain some strange  strips on the surface (picture is in the attachment). Increasing of viscosity and decreasing of dt didn't worked.
> Also some vertical strips occur when seiches undergoes strong interaction with the bottom topography (it looks like instability). Picture of temperature in vertical cross section is also attached.
> Can you give some ideas to overcome this problem?    
> 
> Thanks 
> Kateryna.
> 
> 
> My data file is
> 
> # ====================
> # | Model parameters |
> # ====================
> #
> # Continuous equation parameters
>  &PARM01
>  tRef=100*20.,
>  sRef=100*0.,
>  viscAh=8.E-4,
>  viscAz=8.E-4,
>  bottomDragLinear=0.E-4,
>  no_slip_sides=.FALSE.,
>  no_slip_bottom=.FALSE.,
>  diffKhT=8.E-4,
>  diffKzT=8.E-4,
>  diffKhS=8.E-4,
>  diffKzS=8.E-4,
>  f0=0.e-4,
>  beta=0.E-11,
>  eosType='LINEAR',
>  rigidLid=.FALSE.,
>  implicitFreeSurface=.TRUE.,
>  gravity =9.81,
>  nonHydrostatic=.TRUE.,
>  readBinaryPrec=64,
>  staggerTimeStep=.TRUE.,
>  hFacMin= 0.001,
> #- not safe to use globalFiles in multi-processors runs
>  useSingleCpuIO =.TRUE.,
>  tempAdvScheme=77,
>  &
> 
> # Elliptic solver parameters
>  &PARM02
>  cg2dMaxIters=300,
>  cg2dTargetResidual=1.E-13,
>  cg3dMaxIters=20,
>  cg3dTargetResidual=1.E-8,
>  &
> 
> # Time stepping parameters
>  &PARM03
>  nIter0=0,
>  nTimeSteps=900000,
>  deltaT=0.005
>  abEps=0.1,
>  pChkptFreq=50.,
>  chkptFreq=0.0,
>  dumpFreq=20.,
>  monitorSelect=2,
>  monitorFreq=1.,
>  &
> 
> # Gridding parameters
>  &PARM04
>  usingCartesianGrid=.TRUE.,
>  delX=1000*5.0,
>  delY=200*5.0,
> # dYspacing=5,
>  delZ=100*0.3,
>  &
> 
> # Input datasets
>  &PARM05
>  bathyFile='topog.lake',
>  hydrogThetaFile='Temp.init',
>  &
> 
> 
> 
> <strips_on_elevation.jpg>
> <Vertical_temperature.jpg>
> _______________________________________________
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> MITgcm-support at mitgcm.org
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