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1. this one creates genmake_tnc.f
cat genmake_tnc.F |  cpp -traditional -P -DWORDLENGTH=4 -DALLOW_USE_MPI -DALWAYS_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -I/uv/soft/netcdf/3.6.3-intel/include -I/opt/sgi/mpt/mpt-2.05/include
2. this one compiles
ifort  -W0 -WB -convert big_endian -assume byterecl -fPIC -O3 -align -c genmake_tnc.f
3. this one links the libraries to create the executable
ifort  -W0 -WB -convert big_endian -assume byterecl -fPIC -O3 -align -o genmake_tnc genmake_tnc.o -L/uv/soft/netcdf/3.6.3-intel/lib/ -lmpi -lnetcdf
Then you'll have to tinker with the flags etc, until this works "offline", and then you can add the appropriate lines in the build option file (INCLUDES="$INCLUDES -I/uv/soft/netcdf/3.6.3-intel/include", LIBS="$LIBS -L/uv/soft/netcdf/3.6.3-intel/lib").

M.


On Jul 30, 2012, at 7:30 PM, Patti M Sheaffer wrote:

>  Specifically, what is an "inverted comma?" 
> 
> I've noticed some issues with library linking with the -lnetcdf call to 
> gcc this way and am very curious for the fix!  The best I've been able 
> to do is to specifically name the library in the call.  I've built several 
>  of these codes and always have the same problem with netcdf.