[MITgcm-support] Query regarding overlapping in output files

fancer fancer fancer.lancer at gmail.com
Sat Jun 11 09:42:28 EDT 2011


Hi Himansu Pradhan,

You should be careful with initial data. You set inverted bathymetry data.
Correct a bathy_binary.м on:

ieee='b';accuracy='real*8';
t = load('bathy2DIM.txt');
fid=fopen('bathyBOB.bin','wb',ieee);
*fwrite(fid,t',accuracy);*
fclose(fid);

here t' - inverted matrix.

Yours sincerely,
M.S. student of NNSTU named after Alekseev R.E.
Nizhny Novgorod, Russia
Serge Semin

On Sat, Jun 11, 2011 at 3:41 PM, himansu pradhan <oceancalling at gmail.com>wrote:

> *Hello MITgcm users, *
>
> *I am a new user to MITgcm.*
>
> *I am trying to configure MITgcm for observing Internal waves propagation for my region (Bay of Bengal,Indian Ocean).
> Initially, my input files are (a) bathymetry (360*270 matrix)(b) 3 levels temperature file (c) Wind files.
> My /input/data file looks like :
> ====================
> # | Model parameters |
> # ====================
>
> #
> # Continuous equation parameters
>  &PARM01
>  tRef= 26.29,24.29,22.29,
>  sRef= 3*35.,
>  viscAz=1.E-3,
>  viscAh=1.E-2,
>  no_slip_sides=.TRUE.,
>  no_slip_bottom=.TRUE.,
>  diffKhT=1.E-2,
>  diffKzT=1.E-3,
>
>  diffKhS=1.E-2,
>  diffKzS=1.E-5,
>  f0=0,
>  beta=0,
>  gravity=9.81,
>  rigidLid=.FALSE.,
>  implicitFreeSurface=.TRUE.,
>  exactConserv=.TRUE.,
>  eosType='LINEAR',
>  hFacMin=0.2,
>  nonHydrostatic=.FALSE.,
>
>  readBinaryPrec=64,
>  writeBinaryPrec=64,
>  globalFiles=.TRUE.,
>  &
>
> # Elliptic solver parameters
>  &PARM02
>  cg2dMaxIters=1000,
>  cg2dTargetResidual=1.E-13,
>  cg3dMaxIters=50,
>  cg3dTargetResidual=1.E-13,
>
>  &
>
> # Time stepping parameters
>  &PARM03
> startTime=0,
>  endTime=1080,
>  deltaTmom=10,
>  deltaTtracer=10,
>  abEps=0.02,
>  pChkptFreq=4000000.0,
>  chkptFreq=0.0,
>  dumpFreq=20,
>  monitorFreq=20,
>
>  &
>
> # Gridding parameters
>  &PARM04
>  usingCartesianGrid=.TRUE.,
>  usingSphericalPolarGrid=.FALSE.,
>  dXspacing=3600,
>  dYspacing=3600,
>  delZ=3*50,
>  &
>
> # Input datasets
>  &PARM05
>
>  bathyFile='bathyBOB.bin',
>  hydrogThetaFile='temBOB3lvl.bin',
>  zonalWindFile='WINuBOB.bin',
>  meridWindFile='WINvBOB.bin',
>  checkIniTemp=.false.,
>  &
>
> My query is: the output depth files (Depth.data and Depth.meta) plots is seen different to that of input bathymetry file(bathyBOB.bin,bathy2DIM.txt). I am confused
>
> : Is the model overwritting/overlapping the output file or anything else......?????? Do help.
>
> The images of model output and input bathymetry is in the attached tar file (himansu_project.tar.gz). The other required informations ( code and input directory)
>
> is also in the tar file.
>
> Thanking you in advance
>
> Himansu , PhD student
> Indian Institute of Technology,Delhi
> India.
> *
>
>
> _______________________________________________
> MITgcm-support mailing list
> MITgcm-support at mitgcm.org
> http://mitgcm.org/mailman/listinfo/mitgcm-support
>
>
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