[MITgcm-support] convincing compiler of node memory size

Santha Akella santha.akella at gmail.com
Thu Apr 15 11:26:44 EDT 2010


I am able to build and run my adjoint model okay.
Here is what I have in my tamc.h for the checkpointing.
#ifdef ALLOW_TAMC_CHECKPOINTING

      integer    nchklev_1
      parameter( nchklev_1      =    16 )
      integer    nchklev_2
      parameter( nchklev_2      =    12 )
      integer    nchklev_3
      parameter( nchklev_3      =    10 )
      integer    nchklev_4
      parameter( nchklev_4      =    8 )
----
as you see, i use other levels as well.
Also I use only 120 cpus in my SIZE.h , and build with
linux_ia64_ifort+mpi_altix_nas
Johnny Chang  @ NAS user services was very helpful. Hope that helps,
Santha



On Thu, Apr 15, 2010 at 11:14 AM, Martin Losch <Martin.Losch at awi.de> wrote:

> Hi Holly,
>
> usually the default "memory model" only allows access to 2GB of RAM. Look
> for a flag that lets you change the memory model to something like "medium"
> (for pgf compilers I once used -mc_mode=medium, if I remember correctly).
>
> Martin
>
> On Apr 15, 2010, at 5:00 PM, Holly Dail wrote:
>
> > Hello all -
> >
> > I'm trying to build an adjoint code for the Nehalem nodes on Pleiades,
> and am getting the same error reported in January by Santha here:
> > http://mitgcm.org/pipermail/mitgcm-support/2010-January/006434.html
> >
> > Reducing my nchklev_1 does allow a successful compile, but I don't seem
> to be able to generate a binary that uses anywhere close to the 3 GB
> available on the Nehalem nodes.  In my config, if I use nchklev_1 = 30 I get
> a binary that uses nearly 1 GB, but if I set nchklev_1 = 80 the link fails.
> >
> > The head nodes have 4 GB of memory, but perhaps there is a setting
> somewhere telling the compiler 1 GB is the maximum?  I imagine I could
> submit the compile to the queue, but is there another solution?
> >
> > I'm using linux_ia64_ifort+mpi_ice_nas with -xSSE4.2.
> >
> > Thanks -
> > Holly
> >
> > _______________________________________________
> > MITgcm-support mailing list
> > MITgcm-support at mitgcm.org
> > http://mitgcm.org/mailman/listinfo/mitgcm-support
>
>
> _______________________________________________
> MITgcm-support mailing list
> MITgcm-support at mitgcm.org
> http://mitgcm.org/mailman/listinfo/mitgcm-support
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mitgcm.org/pipermail/mitgcm-support/attachments/20100415/2dc89b44/attachment.htm>


More information about the MITgcm-support mailing list