[MITgcm-support] upgrade to latest checkpoint

[Klymak Jody]

Hmmm, the code now writes as the MDS files as:

outputdir/0000/V.00000001200.001.001.meta
outputdir/0000/V.00000001200.001.001.data

outputdir/0001/V.00000001200.001.002.meta
outputdir/0001/V.00000001200.001.002.data

i.e where 0000, 0001, etc are directories containing the output from  
each processor used to make the run (which also is the output of each  
tile in my setup).  It used to put these all in one directory, and  
rdmds seems to handle that fine.  Probably the easiest thing would be  
if there is a way to stop the new behaviour.

If that is the file structure you have then I'm a little confused how  
to call the function.  Normally I'd just do

   V = rdmds('outputdir/V',1200);

and that would return all tiles.  I can do

   V=rdmds('outputdir/0001/V',1200);

but that just returns the second tile.

Thanks,  Jody


On 15-Aug-09, at 6:12 PM, Holly Dail wrote:

> Hi Jody -
>
> Unless I misunderstand the file structure you're describing, the  
> attached rdmds.m works fine for me with a call like:
>
> 	xx_hfluxm_iter2 = rdmds([run2,'/xx_hfluxm.0000000002']);
>
> <rdmds.m>
>
>
> I would guess the version in the CVS under MITgcm/utils/matlab/ 
> rdmds.m probably works too, but I haven't updated that code recently.
>
> Holly
>
>
> On Aug 15, 2009, at Aug 15 , 6:27 PM, Klymak Jody wrote:
>
>> 	
>> Hi all,
>>
>> I just upgraded from a 2006 version of the gcm to c61T.  It looks  
>> like its working, but a few of the utility routines have changed so  
>> I have some debugging before I'm sure my code mods are correct.  A  
>> couple of questions in the meantime:
>>
>> Does anyone have an rdmds.m that works with the new file structure  
>> (i.e. 0000/*.001.data, 0001/*.002.data, etc) or is there an easy  
>> way to turn that file structure off?
>>
>> DRF.*, DRC.*, PHrefC.*, PHrefF.*, RC.* and RF.* all are written to  
>> the directory the gcm is run from, not from the directory indicated  
>> by mdsioLocalDir, where everything else goes.  This was a problem  
>> in the 2006 version as well, and I think qualifies as a bug.  Looks  
>> like write_glvec_rs.F,  doesn't respect mdsionLocalDir.
>>
>> Thanks,  Jody
>>
>> --
>> Jody Klymak
>> http://web.uvic.ca/~jklymak
>>
>> _______________________________________________
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>> MITgcm-support at mitgcm.org
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>
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