[MITgcm-support] Re: MITgcm-support Digest, Vol 63, Issue 18

Thu Sep 25 13:32:38 EDT 2008

Hi,
thanks for the answer. I've a dual G5 with standard config. As you  
suggested,  I've made the./testreport and everything was fine but the  
command ./mitgcmuv was still not working. I repeated the procedure  
for the compilation and I discovered that the problem was due to the  
fact
that the last time I forgot to make the ln -s ../input/* . before  
running the model... Sorry for that.

Thanks for the infos on the documentation. Suggestion: it could be  
useful to include this tutorial in the list of Tutorials on the web  
page.
In my browser, under Tutorials on the left column there is only a  
short list of (I presume) old tutorials, not including this one.

Daniele

Stazione Zoologica "A. Dohrn"
Villa comunale
80121 Naples Italy
Ph. +390815833201
Fax +390815833224

Il giorno 25/set/08, alle ore 18:00, mitgcm-support- 
request at mitgcm.org ha scritto:

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> Today's Topics:
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>    1. Problems with tutorial_global_oce_biogeo (Daniele Iudicone)
>    2. Re: Problems with tutorial_global_oce_biogeo (Martin Losch)
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> ----------------------------------------------------------------------
>
> Message: 1
> Date: Thu, 25 Sep 2008 10:24:05 +0200
> From: Daniele Iudicone <iudicone at szn.it>
> Subject: [MITgcm-support] Problems with tutorial_global_oce_biogeo
> To: MITgcm-support at mitgcm.org
> Message-ID: <53513637-9DF7-4326-8393-6E3F09A9C81A at szn.it>
> Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed
>
> Hi,
> I've installed the code on a Mac PPC G5 bipro. Trying to run the
> tutorial verification/tutorial_global_oce_biogeo with g77 I've got
> this error message:
>
> (PID.TID 0000.0001) //
> =======================================================
> (PID.TID 0000.0001) // Model parameter file "data"
> (PID.TID 0000.0001) //
> =======================================================
> (PID.TID 0000.0001)
> (PID.TID 0000.0001) S/R INI_PARMS ; starts to read PARM01
> namelist read start : end of file
> apparent state: unit 11 named /tmp/tmp.F6oZFSJ
> last format: list io
> lately reading sequential formatted external IO
> Abort trap
>
> Could you help me? I've tryed
>
> Is there any documentation (papers, for instance) on this particular
> configuration?
>
> Thank you in advance.
>
> Best regards,
> Daniele Iudicone
>
> Stazione Zoologica "A. Dohrn"
> Villa comunale
> 80121 Naples Italy
> Ph. +390815833201
> Fax +390815833224
>
>
>
> ------------------------------
>
> Message: 2
> Date: Thu, 25 Sep 2008 11:47:54 +0200
> From: Martin Losch <Martin.Losch at awi.de>
> Subject: Re: [MITgcm-support] Problems with tutorial_global_oce_biogeo
> To: mitgcm-support at mitgcm.org
> Message-ID: <5F10D90C-3348-400F-A2AE-F92B152ED43B at awi.de>
> Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed
>
> Daniele,
> the documentation for this tutorial is in the---surprise, suprise---
> model documentation, see here:
> <http://mitgcm.org/r2_manual/latest/online_documents/node155.html>
> but that's probably not what you meant.
>
> Your problem is connected to reading the name lists. Some compilers
> require a "/" at the end of the namelists, others "&". The latter is
> the default in the MITgcm/verification directory. You can tell the
> code that your compiler requires "/" by adding -DNML_TERMINATOR to
> the  DEFINES variable in your build options file (and redo "make
> makefile && make CLEAN && make depend && make).
> Can you please tell us what your build options files looks like. I
> have no problems with (the default:) darwin_ppc_g77 (and the latest
> code) on a G4 PowerBook. I have to admit that I don't now what the
> "bipro" stands for. This is what I did:
> cd verification
> ./testreport -t tutorial_global_oce_biogeo
> This test passes. Unless you have modified anything in the name list
> files you should get the something like this:
> Y Y Y Y>14<16 16 16 16 16 16 16 13 16 16 16 13 16 16 16 16 16 16 16
> 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass
> tutorial_global_oce_biogeo
>
>
> Martin
>
> On 25 Sep 2008, at 10:24, Daniele Iudicone wrote:
>
>> Hi,
>> I've installed the code on a Mac PPC G5 bipro. Trying to run the
>> tutorial verification/tutorial_global_oce_biogeo with g77 I've got
>> this error message:
>>
>> (PID.TID 0000.0001) //
>> =======================================================
>> (PID.TID 0000.0001) // Model parameter file "data"
>> (PID.TID 0000.0001) //
>> =======================================================
>> (PID.TID 0000.0001)
>> (PID.TID 0000.0001) S/R INI_PARMS ; starts to read PARM01
>> namelist read start : end of file
>> apparent state: unit 11 named /tmp/tmp.F6oZFSJ
>> last format: list io
>> lately reading sequential formatted external IO
>> Abort trap
>>
>> Could you help me? I've tryed
>>
>> Is there any documentation (papers, for instance) on this
>> particular configuration?
>>
>> Thank you in advance.
>>
>> Best regards,
>> Daniele Iudicone
>>
>> Stazione Zoologica "A. Dohrn"
>> Villa comunale
>> 80121 Naples Italy
>> Ph. +390815833201
>> Fax +390815833224
>>
>> _______________________________________________
>> MITgcm-support mailing list
>> MITgcm-support at mitgcm.org
>> http://mitgcm.org/mailman/listinfo/mitgcm-support
>
>
>
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> End of MITgcm-support Digest, Vol 63, Issue 18
> **********************************************

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