[MITgcm-support] File Read Errors, DWORDLENGTH
Ryan Abernathey
rpa at MIT.EDU
Wed Jul 18 08:54:19 EDT 2007
Hi Helen,
Thanks a lot. I tried to modify genmake to get it working, and it did
compile, but apparently it doesn't work right.
Unfortunately, I can't access those files. You could either open the
permissions up or you could just email me the genmake. Are there any
other differences in the code? I am using the offline model code that
was in your home directory on ACES.
-Ryan
p.s. We're apparently in the same group on columbia, so you could
make the directories group readable.
On Jul 17, 2007, at 6:29 PM, helen hill wrote:
> Hi Ryan
> ../../tools/genmake -enable=ptracers -mods=../code -platform=nas+pgi
> in /u/helenhil/ACCtrace/offline_model/helen-meansolve-np16/bin
> makes a 16 processor executable of the kind you are looking for -
> let me know if the permissions are no good...
> H
>
>
> On 7/17/07, Ryan Abernathey <rpa at mit.edu> wrote:
> Hello,
>
> I'm trying to run an offline version of the MITgcm on columbia, and
> I've encountered an error that I don't fully understand.
>
> The model crashes at this step:
> (PID.TID 0002.0001) MDSREADFIELD: opening global file: bathy.bin
> With the following in message to stderr:
> forrtl: severe (36): attempt to access non-existent record, unit 9,
> file /nobackup2c/rpa/ACC/GCM_runs/fixup/level_01/1/bathy.bin
> Image PC Routine Line
> Source
> mitgcmuv 4000000000288AD0 Unknown Unknown
> Unknown
> mitgcmuv 4000000000283E50 Unknown Unknown
> Unknown
> mitgcmuv 400000000020D0D0 Unknown Unknown
> Unknown
> mitgcmuv 40000000001710A0 Unknown Unknown
> Unknown
> mitgcmuv 40000000001705D0 Unknown Unknown
> Unknown
> mitgcmuv 400000000019D890 Unknown Unknown
> Unknown
> mitgcmuv 400000000005DDB0 Unknown Unknown
> Unknown
> mitgcmuv 4000000000162540 Unknown Unknown
> Unknown
> mitgcmuv 400000000013A3E0 Unknown Unknown
> Unknown
> mitgcmuv 4000000000153780 Unknown Unknown
> Unknown
> mitgcmuv 40000000001649D0 Unknown Unknown
> Unknown
> mitgcmuv 4000000000100500 Unknown Unknown
> Unknown
> mitgcmuv 4000000000003B00 Unknown Unknown
> Unknown
> libc.so.6.1 2000000003BB5C50 Unknown Unknown
> Unknown
> mitgcmuv 4000000000003840 Unknown Unknown
> Unknown
>
> I followed the advice here:
> http://forge.csail.mit.edu/pipermail/mitgcm-support/2004-November/
> 002731.html
>
> And changed -DWORDLENGTH=4 to -DWORDLENGTH=1
>
> This caused the program to crash even earlier at:
> (PID.TID 0000.0001) S/R INI_PARMS ; read PARM05 : OK
> with the error:
> forrtl: severe (66): output statement overflows record, unit 9,
> file /nobackup2c/rpa/ACC/GCM_runs/fixup/level_01/1/XC.001.001.data
> Image PC Routine Line
> Source
> mitgcmuv 4000000000288A90 Unknown Unknown
> Unknown
> mitgcmuv 4000000000283E10 Unknown Unknown
> Unknown
> mitgcmuv 400000000020D090 Unknown Unknown
> Unknown
> mitgcmuv 4000000000171060 Unknown Unknown
> Unknown
> mitgcmuv 4000000000170590 Unknown Unknown
> Unknown
> mitgcmuv 40000000001C76C0 Unknown Unknown
> Unknown
> mitgcmuv 40000000001C50C0 Unknown Unknown
> Unknown
> mitgcmuv 400000000006BC40 Unknown Unknown
> Unknown
> mitgcmuv 40000000000A9860 Unknown Unknown
> Unknown
> mitgcmuv 400000000013DA60 Unknown Unknown
> Unknown
> mitgcmuv 4000000000153720 Unknown Unknown
> Unknown
> mitgcmuv 4000000000164990 Unknown Unknown
> Unknown
> mitgcmuv 40000000001004C0 Unknown Unknown
> Unknown
> mitgcmuv 4000000000003B00 Unknown Unknown
> Unknown
> libc.so.6.1 2000000003BB5C50 Unknown Unknown
> Unknown
> mitgcmuv 4000000000003840 Unknown Unknown
> Unknown
>
> --------------
>
> I am using an offline version of the model given to me by Helen
> which uses genmake rather than genmake2. I added these options for
> compiling to the genmake script:
>
> case nas+mpi:
> set CPP = ( '/lib/cpp -traditional -P' )
> set DEFINES = ( ${DEFINES} '-DALLOW_USE_MPI -
> DALWAYS_USE_MPI -DWORDLENGTH=4' ) # or -DWORDLENGTH=1
> set LIBS = ( '-L/opt/intel_9.0.03x/lib -lmpi' )
> set FC = ( '/opt/intel/comp/9.1.039/bin/ifort' )
> set LINK = ( '/opt/intel/comp/9.1.039/bin/ifort' )
> set FFLAGS = ( '-mp -132 -r8 -i4 -w95 -W0 -WB -i-static -
> convert big_endian -assume byterecl' )
> breaksw
>
> This is a 16 processor mpi run.
>
> I am new to the GCM, so please let me know if there is any more
> information I can provide.
> If anyone knows how to overcome this error, I would greatly
> appreciate your advice.
>
> Cheers,
>
> __________________
> Ryan Abernathey
> rpa at mit.edu
> MIT Ph.D. Student
> Program in Oceans Atmospheres & Climate
> http://web.mit.edu/rpa/
>
>
>
>
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>
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