[MITgcm-support] question about testscript

Martin Losch mlosch at awi-bremerhaven.de
Tue Oct 28 09:08:35 EST 2003


Hi,

Ed, I am afraid, I cannot give you access to my Laptop, it's behind a 
firewall, but I have the same problems on a linux box. I don't that 
it's a problem Mac OSX, see below.

Patrick, your summary.txt looks similar to mine, the following 
experiments give no results:
front_relax, global_ocean.90x40x15, hs94.1x64x5, and lab_sea (you 
actually have one more, global_ocean.cs32x15). But these are exactly 
the experiments I am talking about. The first three have a separate 
"build" directory and the lab_sea actually fails while compiling, see 
for yourself:
> Experiment:  lab_sea
>
> genmake ... succesful
> make CLEAN ... succesful
> make depend ... succesful
> make ... gmredi_xtransport.f:2914: warning: unused variable `km1'
> cat gmredi_ytransport.F | ../../../tools/set64bitConst.sh | 
> /usr/bin/cpp -traditional -P -DWORDLENGTH=4 -DDISABLE_DEBUGMODE -I. > 
> gmredi_ytransport.f
> g77 -Wimplicit -Wunused -Wuninitialized -O3 -funroll-loops -c 
> gmredi_ytransport.f
> gmredi_ytransport.f: In subroutine `gmredi_ytransport':
> gmredi_ytransport.f:2915: warning: unused variable `maskp1'
> gmredi_ytransport.f:2914: warning: unused variable `kp1'
> gmredi_ytransport.f:2914: warning: unused variable `km1'
> cat kpp_calc.F | ../../../tools/set64bitConst.sh | /usr/bin/cpp 
> -traditional -P -DWORDLENGTH=4 -DDISABLE_DEBUGMODE -I. > kpp_calc.f
> :104: SEAICE_EXTERNAL.h: No such file or directory
> make: *** [kpp_calc.f] Error 1

a quick search gives:
csysm3::verification> find . -name build -print
./carbon/build
./front_relax/build
./global_ocean.90x40x15/build
./global_ocean.cubed32x32x30/build
./hs94.1x64x5/build
./tidal_basin_2d/build

global_ocean.cubed32x32x30/build and tidal_basin_2d/build are not used, 
that's why testreport doesn't fail them. This is my summary file:
> Tue Oct 28 11:47:18 CET 2003
>                 T           S           U           V
> G D M    c        m  s        m  s        m  s        m  s
> E p a R  g  m  m  e  .  m  m  e  .  m  m  e  .  m  m  e  .
> N n k u  2  i  a  a  d  i  a  a  d  i  a  a  d  i  a  a  d
> 2 d e n  d  n  x  n  .  n  x  n  .  n  x  n  .  n  x  n  .
>
> OPTFILE=/mlosch/MITgcm/tools/build_options/darwin_g77
>
> Y Y Y Y 14 16 16 16  0 16 16 16 16 16 16 22  0 16 16 22  0 pass  
> adjust_nlfs.cs-32x32x1
> Y Y Y Y 13 16 16 16  0 16 16 16 16 16 16 16 16 13 12 13 13 pass  
> adjustment.128x64x1
> Y Y Y Y 14 16 16 16  0 16 16 16 16 16 13  0  0 13 16  0  0 pass  
> adjustment.cs-32x32x1
> Y Y Y Y -- 14 13 16 13 14 13 13 13 16 16 16 16 16 16 16 16 N/O   
> advect_cs
> Y Y Y Y -- 22 16 16 16 16 16 16 13 16 16 16 16 16 16 16 16 N/O   
> advect_xy
> Y Y Y Y -- 13 13 13 16 16 16 16 16 16 16 22 16 16 16 16 16 N/O   
> advect_xz
> Y Y Y Y 13 16 16 13 16 16 16 13 16 16 16 13 16 16 16 12 16 pass  
> aim.5l_Equatorial_Channel
> Y Y Y Y 16 16 16 16 16 16 16 13 16 16 16 16 16 16 16 13 16 pass  
> aim.5l_LatLon
> Y Y Y Y 14 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass  
> aim.5l_cs
> Y Y Y Y 13 16 16 16 16 16 16 16 16 16 16 12 13 13 13 12 16 pass  exp0
> Y Y Y Y 14 16 16 16 13 16 16 12 22 16 16 16 16 16 16 22 16 pass  exp1
> Y Y Y Y 13 13 16 16 16 16 13 16 13 13 13 13 16 13 13 13 13 pass  exp2
> Y Y Y Y 12 16 16 16 16 16 16 16 22 16 13 16 16 13 13 12 16 FAIL  exp4
> Y Y Y Y 13 16 16 16 13 16 16 16 16 12 12  5 13 12 12  6 13 pass  exp5
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> front_relax
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> global_ocean.90x40x15
> Y Y Y Y  8 16 10 12 11 12 12 16 12 10  9 10 10 10 10 10 10 FAIL  
> global_ocean.cs32x15
> Y Y Y Y  6  8  9 11 10 11 11 13 12  8  8  8  9  8  8  8 10 FAIL  
> global_ocean_pressure
> Y Y Y Y 13 16 16 13 16 16 16 13 13 12 13 13 13 12 13 13 16 pass  
> global_with_exf
> Y Y Y Y 13 16 16 16 16 16 16 16 16 11 13 13 13 16 13  8 13 pass  
> hs94.128x64x5
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> hs94.1x64x5
> Y Y Y Y 13 16 16 16 13 16 16 16 16 13 16 13 16 16 16 22 13 pass  
> hs94.cs-32x32x5
> Y Y Y Y 10 10 16 12 13 16 16 16 22 16 13 12 13 12 13 22 12 FAIL  
> ideal_2D_oce
> Y Y Y Y  8 16 16 16 13 16 16 16 16 13 13  8 16 22 22 22 22 FAIL  
> internal_wave
> Y Y Y Y 14 16 16 16 16 16 16 16 16 13 13 22 13 13 13 22 16 pass  
> inverted_barometer
> Y Y N N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> lab_sea
> Y Y Y Y 10 13 16 16 16 13 13 16 13 12 12 11 13 13 12 11 13 FAIL  
> natl_box
> Y Y Y Y  9 16 16 13 16 16 16 16 22 13 12 11 16 22 22 22 22 FAIL  
> plume_on_slope
> Y Y Y Y 13 16 16 16 16 13 16 13 13 13 16 16 16 13 16 16 16 pass  
> solid-body.cs-32x32x1

Could you have a look whether that's true for your system, too?

Martin

On Tuesday, October 28, 2003, at 02:45  PM, Patrick Heimbach wrote:

> Hi there,
>
> this is the testreport which I ran for a freshly checked out
> version of the model (checkpoint51p_post).
> It seemed to run fine through the experiments,
> unlike what you've experienced.
> However, there are few FAIL's, not sure whether they're
> supposed to be failing...
>
> Y Y Y Y 13 16 16 16 16 16 16 16 16 16 16 16 16 13 13 13 13 pass  
> adjustment.128x64x1
> Y Y Y Y 14 16 16 16  0 16 16 16 16 16 16  0  0 16 16  0  0 pass 
> adjustment.cs-32x32x1
> Y Y Y Y 14 16 16 16  0 16 16 16 16 16 16 22  0 16 16 22  0 pass 
> adjust_nlfs.cs-32x32x1
> Y Y Y Y -- 14 16 16 13 16 16 16 16 16 16 16 16 16 16 16 16 N/O   
> advect_cs
> Y Y Y Y -- 22 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 N/O   
> advect_xy
> Y Y Y Y -- 13 16 16 16 16 16 16 16 16 16 22 16 16 16 16 16 N/O   
> advect_xz
> Y Y Y Y 14 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass  
> aim.5l_cs
> Y Y Y Y 14 16 16 16 16 16 16 16 16 16 13 16 16 16 16 12 16 pass 
> aim.5l_Equatorial_Channel
> Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 13 16 pass  
> aim.5l_LatLon
> Y Y Y Y 13 16 16 16 16 16 16 16 16 16 16 13 16 13 13 13 16 pass  exp0
> Y Y Y Y 14 16 16 16 16 16 16 16 22 16 16 16 16 16 16 22 16 pass  exp1
> Y Y Y Y 13 13 16 16 16 16 13 16 13 13 13 16 16 13 13 13 16 pass  exp2
> Y Y Y Y 12 16 16 13 16 16 16 16 22 13 16 16 16 16 16 13 16 FAIL  exp4
> Y Y Y Y 11 16 16 16 16 16 16 16 16 12 13  6 13 13 12  5 13 FAIL  exp5
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> front_relax
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O 
> global_ocean.90x40x15
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O 
> global_ocean.cs32x15
> Y Y Y Y  6 11 12 13 13 12 12 13 12  9  9  9 10 10  9  9 11 FAIL 
> global_ocean_pressure
> Y Y Y Y 13 16 16 16 13 16 13 16 12 13 13 13 13 12 13 12 16 pass  
> global_with_exf
> Y Y Y Y 14 16 16 16 16 16 16 16 16 11 11 13 12 13 13  8 16 pass  
> hs94.128x64x5
> Y Y Y N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> hs94.1x64x5
> Y Y Y Y 14 16 16 16 16 16 16 16 16 13 13 13 13 16 16 22 13 pass  
> hs94.cs-32x32x5
> Y Y Y Y  9 10 16 13 13 16 16 16 22 16 13 12 16 13 12 22 12 FAIL  
> ideal_2D_oce
> Y Y Y Y  8 16 16 16 16 16 16 16 16 13 13  8 13 16 16 16 16 FAIL  
> internal_wave
> Y Y Y Y 14 16 16 16 16 16 16 16 16 13 13 22 13 13 13 22 16 pass  
> inverted_barometer
> Y Y N N -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- N/O   
> lab_sea
> Y Y Y Y 10 16 16 16 16 16 16 16 16 12 12 11 13 13 12 11 13 FAIL  
> natl_box
> Y Y Y Y  9 13 16 16 16 16 16 16 22 12 12 10 13 16 16 16 16 FAIL  
> plume_on_slope
> Y Y Y Y 13 16 16 16 16 13 16 16 16 16 16 16 16 16 16 16 16 pass 
> solid-body.cs-32x32x1
>
> -p.
>
>
>
> Martin Losch wrote:
>> Hi,
>> I just downloaded a fresh version of the MAIN branch and I am running 
>> ./testreport in verification. As far as I can see, all experiments 
>> which use a separate build directory (instead of input) fail on my 
>> machines (Redhat9-Linux and Mac OS X, basically BSD-Unix), the reason 
>> is the line (actually twice, once in the functioin "linkdata"):
>>  "( cd $dir/build; ln -sf ../input/* )"
>> This line returns
>> ln: ./CVS: Operation not permitted
>> before genmake and after make
>> because in build there is already a ./CVS directory. Then the model 
>> is not run because of the && after linkdata returned an error code.
>> Am only I having the problem? If so, what can I do about it?
>> Martin
>> Martin Losch // mailto:mlosch at awi-bremerhaven.de
>> Alfred-Wegener-Institut für Polar- und Meeresforschung
>> Postfach 120161, 27515 Bremerhaven, Germany
>> Tel./Fax: ++49(471)4831-1872
>> http://www.awi-bremerhaven.de/People/show?mlosch
>> _______________________________________________
>> MITgcm-support mailing list
>> MITgcm-support at mitgcm.org
>> http://dev.mitgcm.org/mailman/listinfo/mitgcm-support
>
>
> -- 
> Patrick Heimbach ........................... M.I.T
> FON: +1/617/253-5259 .......... EAPS, Room 54-1518
> FAX: +1/617/253-4464 ..... 77 Massachusetts Avenue
> mailto:heimbach at mit.edu ....... Cambridge MA 02139
> http://www.mit.edu/~heimbach/ .............. U.S.A
>
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