[Mitgcm-support] Fw: joinmds on Alpha

Wed Jul 9 15:56:17 EDT 2003

----- Original Message -----
From: "Arne Biastoch" <abiastoch at ifm.uni-kiel.de>
To: "Chris Hill" <cnh at plume.mit.edu>
Cc: "Alistair Adcroft" <adcroft at mit.edu>; "xing"
<xing at pacific.jpl.nasa.gov>; "support" <support at mitgcm.org>
Sent: Friday, November 16, 2001 4:26 AM
Subject: Re: joinmds on Alpha


>
> Hi Chris,
>
> got the error. Perl 5.001 was too old. After installing the most recent
> version (v5.6.1) everything worked fine.
>
> Thanks for your help.
>
> -Arne
>
>
> Chris Hill wrote:
>
> > Hi Arne,
> >
> >  I tested on an Alpha machine here with 512MB memory. It appeared to
work
> > fine.
> >
> > Attached is text output from
> > joinmds T 0000000144
> >
> > attachment also gives my shell limits at the bottom.
> > OS revision is OSF1 4.0 878.
> > perl -v gives
> > 5.004_03
> >
> > Not sure what your problem could be. This script is usually very
reliable.
> >
> > Chris
> > ----- Original Message -----
> > From: "Arne Biastoch" <abiastoch at ifm.uni-kiel.de>
> > To: "Chris Hill" <cnh at plume.mit.edu>; "Alistair Adcroft"
<adcroft at mit.edu>;
> > <xing at pacific.jpl.nasa.gov>
> > Sent: Thursday, November 15, 2001 10:35 AM
> > Subject: Re: joinmds on Alpha
> >
> >
> >
> >>Hi all,
> >>
> >>did anyone of you find an explanation for the failing joinmdsr?
> >>Or a solution?
> >>
> >>-Arne
> >>
> >>
> >>Chris Hill wrote:
> >>
> >>
> >>>Arne,
> >>>
> >>> If you have time to transfer files to
> >>>
> >>> biastoch at eliot.lcs.mit.edu:/export/d15/biastoch
> >>>
> >>> I can try a quick test on one of our Alphas.
> >>>
> >>>Chris
> >>>Alistair Adcroft wrote:
> >>>
> >>>
> >>>>Arne,
> >>>>
> >>>>We run joinmds on Alpha's here. Are you trying merge the Cray files on
> >>>>
> > the Alpha
> >
> >>>>or Alpha files on the Alpha? The big/little endian thing hasn't been a
> >>>>
> > problem
> >
> >>>>before.
> >>>>It sounds more like either a perl problem or a shell memory problem.
> >>>>
> >>>>Try "unlimit" to remove all stacksizes etc....
> >>>>
> >>>>What version of perl are you using?
> >>>>
> >>>>perl -v
> >>>>
> >>>>Try using the -d option (debugger) to see where it dies.
> >>>>
> >>>>I'll copy this to  Zhangfan (xing at pacific.jpl.nasa.gov) who wrote the
> >>>>
> > script.
> >
> >>>>Alistair.
> >>>>
> >>>>Arne Biastoch wrote:
> >>>>
> >>>>
> >>>>>Hi Alistair,
> >>>>>
> >>>>>greetings from Germany. After almost two month to be back in Kiel I
try
> >>>>>to stand all MOM fetishists and to continue - at least from time to
> >>>>>
> > time
> >
> >>>>>- working with MITgcmUV.
> >>>>>
> >>>>>My first runs on a Cray T3E were successful (though I had to modify
> >>>>>
> > some
> >
> >>>>>details in the MPI routines: MPI_REAL4 and MPI_REAL8 are not
available
> >>>>>and had to be changed to MI_REAL and MPI_DOUBLEPRECISION).
> >>>>>
> >>>>>But I ran into a problem merging the local files to global ones on a
> >>>>>
> > DEC
> >
> >>>>>Alpha. Using the joinmds (actually an older one called joinmdsr)
> >>>>>
> > routine
> >
> >>>>>gave the following:
> >>>>>
> >>>>>
> >>>>>
> >>>
> >>
> >>
> >>--
> >>
> >>Dr. Arne Biastoch
> >>
> >>Institute for Marine Research         phone: ++49 431 600-4013
> >>FB1 Ocean Circulation and Climate     fax  : ++49 431 600-1515
> >>Duesternbrooker Weg 20                email: abiastoch at ifm.uni-kiel.de
> >>24105 Kiel, Germany
> >>
> >>http://www.ifm.uni-kiel.de/to/data/pers/abiastoch.html
> >>
> >>
> >>
> >>
> >>
> >>------------------------------------------------------------------------
> >>
> >>Name "main::nrecords_" used only once: possible typo at
head/utils/scripts/joinmds line 182.
> >>There are 25 datasets.
> >>All existing meta files are self- and mutually consistent.
> >>Datasets are complete.
> >>Current machine's endianness: little-endian
> >>T.0000000144.001.001.data: 453600 bytes, okay, merged from .
> >>T.0000000144.001.002.data: 453600 bytes, okay, merged from .
> >>T.0000000144.001.003.data: 453600 bytes, okay, merged from .
> >>T.0000000144.001.004.data: 453600 bytes, okay, merged from .
> >>T.0000000144.001.005.data: 453600 bytes, okay, merged from .
> >>T.0000000144.002.001.data: 453600 bytes, okay, merged from .
> >>T.0000000144.002.002.data: 453600 bytes, okay, merged from .
> >>T.0000000144.002.003.data: 453600 bytes, okay, merged from .
> >>T.0000000144.002.004.data: 453600 bytes, okay, merged from .
> >>T.0000000144.002.005.data: 453600 bytes, okay, merged from .
> >>T.0000000144.003.001.data: 453600 bytes, okay, merged from .
> >>T.0000000144.003.002.data: 453600 bytes, okay, merged from .
> >>T.0000000144.003.003.data: 453600 bytes, okay, merged from .
> >>T.0000000144.003.004.data: 453600 bytes, okay, merged from .
> >>T.0000000144.003.005.data: 453600 bytes, okay, merged from .
> >>T.0000000144.004.001.data: 453600 bytes, okay, merged from .
> >>T.0000000144.004.002.data: 453600 bytes, okay, merged from .
> >>T.0000000144.004.003.data: 453600 bytes, okay, merged from .
> >>T.0000000144.004.004.data: 453600 bytes, okay, merged from .
> >>T.0000000144.004.005.data: 453600 bytes, okay, merged from .
> >>T.0000000144.005.001.data: 453600 bytes, okay, merged from .
> >>T.0000000144.005.002.data: 453600 bytes, okay, merged from .
> >>T.0000000144.005.003.data: 453600 bytes, okay, merged from .
> >>T.0000000144.005.004.data: 453600 bytes, okay, merged from .
> >>T.0000000144.005.005.data: 453600 bytes, okay, merged from .
> >>Global data (450x210x30) is in ./T.0000000144.data (endianness is
big-endian).
> >>cputime unlimited
> >>filesize unlimited
> >>datasize 2097152 kbytes
> >>stacksize 1048576 kbytes
> >>coredumpsize unlimited
> >>memoryuse 503456 kbytes
> >>vmemoryuse 2097152 kbytes
> >>descriptors 4096
> >>
>
>
>
> --
>
> Dr. Arne Biastoch
>
> Institute for Marine Research         phone: ++49 431 600-4013
> FB1 Ocean Circulation and Climate     fax  : ++49 431 600-1515
> Duesternbrooker Weg 20                email: abiastoch at ifm.uni-kiel.de
> 24105 Kiel, Germany
>
> http://www.ifm.uni-kiel.de/to/data/pers/abiastoch.html
>
>
>