[MITgcm-devel] something to report

Manfredi Manizza mmanizza at ocean.mit.edu
Mon Oct 21 15:41:35 EDT 2013


Jean-Michel,

Just to clarify, is the nc file that is a bit larger
than the file in binray format whihc  I think is the default..

I tried to impelment your sugggestion,
It blows the model up becuase it looks for a 6th tile
that is not there given that the domain is set for 5 tiles only, see 
below from log file.

I will try to see if I use the grid nc files generated by the run what 
happens to the matlab program that converts the output into lat/lon.
It may work, not sure yet...

forrtl: severe (29): file not found, unit 9, file 
/nobackupp8/mmanizza/llc90/run_nocost/tile006.mitgrid
Image              PC                Routine            Line        Source
libintlc.so.5      00002AAAAC49CF6A  Unknown               Unknown 
Unknown
libintlc.so.5      00002AAAAC49BAE5  Unknown               Unknown 
Unknown
libifcore.so.5     00002AAAAB62DE12  Unknown               Unknown 
Unknown
libifcore.so.5     00002AAAAB5A35CB  Unknown               Unknown 
Unknown
libifcore.so.5     00002AAAAB5A2CDE  Unknown               Unknown 
Unknown
libifcore.so.5     00002AAAAB5C0848  Unknown               Unknown 
Unknown
mitgcmuv           00000000005A2B00  mds_facef_read_rs        1081 
mdsio_facef_read.f
mitgcmuv           0000000000739A5C  ini_curvilinear_g        3482 
ini_curvilinear_grid.f
mitgcmuv           0000000000741804  ini_grid_                3330 
ini_grid.f
mitgcmuv           000000000075D1F1  initialise_fixed_        1904 
initialise_fixed.f
mitgcmuv           00000000007721F2  the_model_main_          3119 
the_model_main.f
mitgcmuv           00000000006DCF82  MAIN__                   4010  main.f
mitgcmuv           0000000000409ABC  Unknown               Unknown 
Unknown
libc.so.6          00002AAAACA1CBC6  Unknown               Unknown 
Unknown
mitgcmuv           00000000004099B9  Unknown               Unknown 
Unknown



Manfredi




On Sun, 20 Oct 2013, Jean-Michel Campin wrote:

> Hi Manfredi,
>
> I don't know what is your "data.exch2" parameter file,
> but I assume that you have:
> W2_useE2ioLayOut=T (this is the default)
> and:
> W2_mapIO   = 1 (this is not the default, which is -1)
> and with some blank tiles ?
>
> Now, the option "W2_useE2ioLayOut" has not been implemented
> in pkg/mnc, and this could explain that you have different
> size between mnc + rdmnc.m and mdsio + rdmds.m
>
> I think that if you set:
> W2_useE2ioLayOut=F
> the plain binary output file (pkg/mdsio + rdmds.m) should have the
> same size the current output that you get with mnc + rdmnc.m
>
> Cheers,
> Jean-Michel
>
> On Sat, Oct 19, 2013 at 12:21:41PM -0400, Manfredi Manizza wrote:
>>
>> Hi,
>>
>> I am reporting a feture I found comparing the output
>> of the ECCO lat-lon-cap global set-up provided by Patrick to me.
>>
>> The dimensions of the files are different depending on the format.
>> If in netcdf :
>>
>> S =
>>
>>          attributes: [1x1 struct]
>>     iters_from_file: [12x1 double]
>>         si_AREAtave: [90x1082x12 double]
>>
>> If in binary :
>>
>>
>>> more pickup_seaice.0000008772.meta
>>  nDims = [   2 ];
>>  dimList = [
>>     90,    1,   90,
>>   1170,    1, 1170
>>  ];
>>  dataprec = [ 'float64' ];
>>  nrecords = [     6 ];
>>  timeStepNumber = [       8772 ];
>>  timeInterval = [  3.157920000000E+07 ];
>>  nFlds = [    6 ];
>>  fldList = {
>>  'siTICE  ' 'siAREA  ' 'siHEFF  ' 'siHSNOW ' 'siUICE  ' 'siVICE  '
>>  };
>>
>>
>> The grid quantities that I have , when loaded, have the dimensions
>> of 90 by 1170.
>>
>> In fact i can use the functions of gcmfaces only using the binary
>> files...
>>
>> I am not sure if there is something I am missing or if
>> there is something wrong in the code. I just felt I needed to
>> send this out.
>>
>> Thanks in advance for your attention.
>>
>> Cheers
>> Manfredi
>>
>>
>>
>>
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>
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