[MITgcm-devel] AMD/64bit/Portlant Group compiler/scali mpi

Martin Losch mlosch at awi-bremerhaven.de
Mon Dec 20 12:11:35 EST 2004


Chris,
I am copying this to Stephan, who is in charge of this cluster, let's 
see, what he says about this. + I'll probably have a chance to talk to 
him tomorrow.
But for now things are running very smoothly (as far as I can tell), 
after this environment variables is set properly!

Martin

On Dec 20, 2004, at 5:58 PM, chris hill wrote:

> Hi Martin,
>
>  I'm guessing this is a futile question but I'll ask. Is there any
> chance we could get a testing account on your cluster. It would be nice
> to make sure things run OK on this system.
>
> Thanks,
>
> Chris
> On Mon, 2004-12-20 at 11:06, Martin Losch wrote:
>> Hey, that was a little quick (o:
>> I wanted to give it a proper name first! For example,
>> linux_amd64_pgf77+mpi_ocl (ocl=name of the machine), because this opt
>> file will not work anywhere else, I am pretty sure, because FC and 
>> LINK
>> refer to some script which is specific to you maching. Oh well.
>>
>> Martin
>>
>> On Dec 20, 2004, at 4:53 PM, Martin Losch wrote:
>>
>>> Hi,
>>> just for the record, today we tried to compile and run the MITgcm on
>>> our new cluster with AMD 64-bit processors (opteron?). We got error
>>> messages like these:
>>>> /opt/scali/bin/mpimon -stdin all  ../bin/mitgcmuv  --  ocl01 1 ocl02
>>>> 1 ocl03 1 o
>>>> cl04 1 ocl05 1
>>>> Dec 20 16:47:58: (mitgcmuv-0 at ocl01)(7023) Error: MPI_Type_hvector is
>>>> deprecated
>>>> on architectures with 32-bit integer and 64-bit pointers; Use
>>>> MPI_Type_create_hv
>>>> ector instead. MPI_Type_hvector can be enabled by setting
>>>> environmentvariable SC
>>>> AMPI_ALLOW_DEPRECATED
>>> [... for each processor ...]
>>>> --- mpimon --- Aborting run after process-1 terminated abnormally
>>>> Childprocess 7
>>>> 603 exited with exitcode 255 ---
>>>>
>>> seting this environment variable SCAMPI_ALLOW_DEPRECATED got rid off
>>> the error message. Does this tell you anything?
>>>
>>> Martin
>>>
>>> Compiler:
>>>> pgf77 5.2-4
>>>> Copyright 1989-2000, The Portland Group, Inc.  All Rights Reserved.
>>>> Copyright 2000-2004, STMicroelectronics, Inc.  All Rights Reserved.
>>> SCALI-MPI (whatever that means)
>>>
>>> The build options file is attached (I'll check that in shortly)
>>>
>>> <linux_amd64_pgf77+mpi>
>>>
>>> _______________________________________________
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>>> http://dev.mitgcm.org/mailman/listinfo/mitgcm-devel
>>
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