[Aces-support] Modules not loading in script submission to acesgrid

[Daniel Enderton]

Yep, that did it.  Thanks Andrew!

Daniel

>hi dan,
>
>i think you need to comment out the pbs -V stuff.  that worked for me.
>
>andrew
>
>Quoting Daniel Enderton <enderton at MIT.EDU>:
>
>>I have a script for PBS submission that opens with:
>>
>>#! /usr/bin/env bash
>>
>>#PBS -N EarthCplC
>>#PBS -q long
>>#PBS -V
>>#PBS -l nodes=8,walltime=12:00:00
>>
>># ITRDA specific calls:
>>. /etc/profile.d/modules.sh
>>module list
>>module add mpich/intel
>>module add python-ext
>>module list
>>...
>>
>>When I submit it in interactive more (qsub -I -l nodes=8; ./qsub 
>>[script name]), all is well.  When I submit in batch mode (qsub 
>>[script name]) it crashes and I get the attached message (below) in 
>>the error file.  Why will the modules not load in batch submission 
>>more for me?  Any idea or suggestions would be very welcome!
>>
>>Thanks,
>>Daniel
>>
>>[enderton at ao EarthCplAlbCon]$ more EarthCplC.e60015
>>ModuleCmd_Load.c(199):ERROR:105: Unable to locate a modulefile for 'man'
>>????8??????c(3):ERROR:105: Unable to locate a modulefile for 'modules'
>>????8??????c(4):ERROR:105: Unable to locate a modulefile for 'rsh'
>>????8??????c(5):ERROR:105: Unable to locate a modulefile for 'torque'
>>?$     $(7):ERROR:105: Unable to locate a modulefile for 'torque'
>>ModuleCmd_Load.c(199):ERROR:105: Unable to locate a modulefile for 'man'
>>???????????c(3):ERROR:105: Unable to locate a modulefile for 'modules'
>>???????????c(4):ERROR:105: Unable to locate a modulefile for 'rsh'
>>???????????c(5):ERROR:105: Unable to locate a modulefile for 'torque'
>>Currently Loaded Modulefiles:
>>ModuleCmd_Load.c(199):ERROR:105: Unable to locate a modulefile for 'man'
>>s??????????c(3):ERROR:105: Unable to locate a modulefile for 'modules'
>>s??????????c(4):ERROR:105: Unable to locate a modulefile for 'rsh'
>>s??????????c(5):ERROR:105: Unable to locate a modulefile for 'torque'
>>?C     $(7):ERROR:105: Unable to locate a modulefile for 'mpich/intel'
>>ModuleCmd_Load.c(199):ERROR:105: Unable to locate a modulefile for 'man'
>>s??????????c(3):ERROR:105: Unable to locate a modulefile for 'modules'
>>s??????????c(4):ERROR:105: Unable to locate a modulefile for 'rsh'
>>s??????????c(5):ERROR:105: Unable to locate a modulefile for 'torque'
>>?C     $(7):ERROR:105: Unable to locate a modulefile for 'python-ext'
>>ModuleCmd_Load.c(199):ERROR:105: Unable to locate a modulefile for 'man'
>>???????????c(3):ERROR:105: Unable to locate a modulefile for 'modules'
>>???????????c(4):ERROR:105: Unable to locate a modulefile for 'rsh'
>>
>>
>>--
>>Daniel Enderton
>>PhD Candidate, Climate Physics and Chemistry
>>Massachusetts Institute of Technology
>>E-Mail:  enderton at mit.edu
>>Phone:  857.204.3542
>>_______________________________________________
>>Aces-support mailing list
>>Aces-support at acesgrid.org
>>http://acesgrid.org/mailman/listinfo/aces-support
>>
>
>
>
>--
>Andrew D. Barton
>Program in Atmospheres, Oceans, and Climate
>77 Massachusetts Ave, 54-1511
>MIT, Cambridge, MA  02139
>tel: 1.617.452.3639
>_______________________________________________
>Aces-support mailing list
>Aces-support at acesgrid.org
>http://acesgrid.org/mailman/listinfo/aces-support


-- 
Daniel Enderton
PhD Candidate, Climate Physics and Chemistry
Massachusetts Institute of Technology
E-Mail:  enderton at mit.edu
Phone:  857.204.3542